Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981818

Identifier: 55981818

GI number: 55981818

Start: 1733793

End: 1735211

Strand: Direct

Name: 55981818

Synonym: TTHA1849

Alternate gene names: NA

Gene position: 1733793-1735211 (Clockwise)

Preceding gene: 55981817

Following gene: 55981819

Centisome position: 93.73

GC content: 73.5

Gene sequence:

>1419_bases
ATGCGTAGGCTTCTCCTTTCCATCGCGTCCCCAGCGTTCCTCCTCGCCGCCTGCGTTCCCACCCCGGGGCCCCGGGCGCC
CGCCGGGGCCCCGGGCGTCCCCCCCTTCCCCGACGCCCGCTTCGCCCTCTACCTGGACCCGGAGGCCCTGCGGCAGGACC
TCCCCACCCTCCCCCTTCCCGCGGCCGAGGCGGTGCGGGAGAGGCTTCCCGGCTTTCCCCTCCTCTTCGCCTTCCTGGGG
ACCGCCCCAAGCGAGGGGTACGGGGTCCGGCTCGGGAAGGCGGTGCGGGAGGGAGGGGCCCTCAAGGTGGAGGTCCGGAC
CTGGGGCCCCGCCGGGCCCCAGGGGAAGGTGCGCTACACCTACCCCCTGGACCTCAGGCCCCTCACGGACCTTCCCCCCT
TCCCCTTTGAGCTCGTCTTCCACACCCCGGAGGGCCGGGTCCTCCACCGCGAACGGGTCCGCCCCCCCGTGGCCACCTCC
GGCAGGGCGGAGGAGGTGGGGGACCCCTACGGGGTGGTGGCCCGCTGGGAGGAGGTCTACCGGGATGGCCCCTACCTGGG
GCGGAACCTGGTGCGCCTCCACGAGGAGGCCTTCGCCGTCTTCTACACCCCGGAGGGAGAGGGAAGCCGCTTCTACCTGG
ACCTCCCCCCCTGGCTCCTCAGGGGGCAGGAGACCCCCCTCTGCGCCCTCACGGACCGGCCGCCCGAGGACCTGGCCCGG
AAGGCGCGGGGAAGCCTCCTGGGGCAGGTCCTCACCCTTAAGGAGGTCTTCGTCCCCCTGAACCAGCGCCACGGCCTCGT
GGAGAGGCCCCTACCCCCGGACAGGGTGCCGGAAAGGGCCTACGTGGCCTGCCTCTACGGGGCCGAGGCCCCAAGGCTCG
AGGCCCTCGGCCCCCTGGTTCTGGACCTGTACCCGGCCCGCCTCGTCCGCCGGGAGCCCCAGAGCGTGGAGGTCCTGCGG
GCGGAGGCCGGGCCCACGGAGCTCGTTTTCCAAGTCCGGCTCCACCCCCTGCCCCTGGGGGACGTCCCCCTGGACCTCTA
CACCCTGGACCCGCCCCGGCTTCCGGGCGGGGAGCGGGTGGTGGCCTTCCCCTACCACGGCTTTGACCGCGACCCCACCC
AGCCCCGCTACGCCTTGAGCCTGCACGAAGGGCCCGGAGGCTTTTTCCTGTGGATCCTCCAGCCCGAGGTCCACACCTTC
ACCCTCTTCGCCCGGCTCACCCTCTGCCAAAAGGCGGAAGGGAAGGCCCTCTCCCCCCTCAACCCTCCCCCCGGGGCCAC
GTGCCCGAGCCTTCCCCTGGTCCAGGCCTCTTACACCCACCGGGGGCTCCTCGGGCCCGGGGCGCCCCTCGCCCTGCGCC
TCCAGTTCCGCTCCCCCGAGGGGTGGCGCTCGGAGCCCTTTGTCGTCACCGTTCCCTAG

Upstream 100 bases:

>100_bases
GACCTACACGGCTCCTTAAACGCTGCTAGACACCCCGCCTCCGGGCCTGGGGGGTCTAGGAAAACGCTCCAGGCCCGGAG
CATTCCCCCAGACCCCACGG

Downstream 100 bases:

>100_bases
GCTTTTCTTCGGGGCCTTCCTTAACCAGGCCTTAACCGACAGGATGGTACAACAAAGGCAAAGGAGGTGCAGGTATGAGG
AAAGGGTTGTGGCTTCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG
TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS
GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR
KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR
AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF
TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP

Sequences:

>Translated_472_residues
MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG
TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS
GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR
KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR
AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF
TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP
>Mature_472_residues
MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG
TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS
GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR
KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR
AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF
TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52033; Mature: 52033

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLP
CCCEEEECCCCHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCC
AAEAVRERLPGFPLLFAFLGTAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYT
HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHHHHHHCCCEEEEEEEECCCCCCCCCEEEE
YPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATSGRAEEVGDPYGVVARWEEVY
ECCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH
RDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR
CCCCHHHHHHHHEECCEEEEEECCCCCCCEEEEECCHHHHCCCCCCEEEECCCCHHHHHH
KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHH
LDLYPARLVRREPQSVEVLRAEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERV
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEE
VAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTFTLFARLTLCQKAEGKALSPL
EEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCC
NPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP
CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLP
CCCEEEECCCCHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCC
AAEAVRERLPGFPLLFAFLGTAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYT
HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHHHHHHCCCEEEEEEEECCCCCCCCCEEEE
YPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATSGRAEEVGDPYGVVARWEEVY
ECCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH
RDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR
CCCCHHHHHHHHEECCEEEEEECCCCCCCEEEEECCHHHHCCCCCCEEEECCCCHHHHHH
KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHH
LDLYPARLVRREPQSVEVLRAEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERV
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEE
VAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTFTLFARLTLCQKAEGKALSPL
EEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCC
NPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP
CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA