| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981818
Identifier: 55981818
GI number: 55981818
Start: 1733793
End: 1735211
Strand: Direct
Name: 55981818
Synonym: TTHA1849
Alternate gene names: NA
Gene position: 1733793-1735211 (Clockwise)
Preceding gene: 55981817
Following gene: 55981819
Centisome position: 93.73
GC content: 73.5
Gene sequence:
>1419_bases ATGCGTAGGCTTCTCCTTTCCATCGCGTCCCCAGCGTTCCTCCTCGCCGCCTGCGTTCCCACCCCGGGGCCCCGGGCGCC CGCCGGGGCCCCGGGCGTCCCCCCCTTCCCCGACGCCCGCTTCGCCCTCTACCTGGACCCGGAGGCCCTGCGGCAGGACC TCCCCACCCTCCCCCTTCCCGCGGCCGAGGCGGTGCGGGAGAGGCTTCCCGGCTTTCCCCTCCTCTTCGCCTTCCTGGGG ACCGCCCCAAGCGAGGGGTACGGGGTCCGGCTCGGGAAGGCGGTGCGGGAGGGAGGGGCCCTCAAGGTGGAGGTCCGGAC CTGGGGCCCCGCCGGGCCCCAGGGGAAGGTGCGCTACACCTACCCCCTGGACCTCAGGCCCCTCACGGACCTTCCCCCCT TCCCCTTTGAGCTCGTCTTCCACACCCCGGAGGGCCGGGTCCTCCACCGCGAACGGGTCCGCCCCCCCGTGGCCACCTCC GGCAGGGCGGAGGAGGTGGGGGACCCCTACGGGGTGGTGGCCCGCTGGGAGGAGGTCTACCGGGATGGCCCCTACCTGGG GCGGAACCTGGTGCGCCTCCACGAGGAGGCCTTCGCCGTCTTCTACACCCCGGAGGGAGAGGGAAGCCGCTTCTACCTGG ACCTCCCCCCCTGGCTCCTCAGGGGGCAGGAGACCCCCCTCTGCGCCCTCACGGACCGGCCGCCCGAGGACCTGGCCCGG AAGGCGCGGGGAAGCCTCCTGGGGCAGGTCCTCACCCTTAAGGAGGTCTTCGTCCCCCTGAACCAGCGCCACGGCCTCGT GGAGAGGCCCCTACCCCCGGACAGGGTGCCGGAAAGGGCCTACGTGGCCTGCCTCTACGGGGCCGAGGCCCCAAGGCTCG AGGCCCTCGGCCCCCTGGTTCTGGACCTGTACCCGGCCCGCCTCGTCCGCCGGGAGCCCCAGAGCGTGGAGGTCCTGCGG GCGGAGGCCGGGCCCACGGAGCTCGTTTTCCAAGTCCGGCTCCACCCCCTGCCCCTGGGGGACGTCCCCCTGGACCTCTA CACCCTGGACCCGCCCCGGCTTCCGGGCGGGGAGCGGGTGGTGGCCTTCCCCTACCACGGCTTTGACCGCGACCCCACCC AGCCCCGCTACGCCTTGAGCCTGCACGAAGGGCCCGGAGGCTTTTTCCTGTGGATCCTCCAGCCCGAGGTCCACACCTTC ACCCTCTTCGCCCGGCTCACCCTCTGCCAAAAGGCGGAAGGGAAGGCCCTCTCCCCCCTCAACCCTCCCCCCGGGGCCAC GTGCCCGAGCCTTCCCCTGGTCCAGGCCTCTTACACCCACCGGGGGCTCCTCGGGCCCGGGGCGCCCCTCGCCCTGCGCC TCCAGTTCCGCTCCCCCGAGGGGTGGCGCTCGGAGCCCTTTGTCGTCACCGTTCCCTAG
Upstream 100 bases:
>100_bases GACCTACACGGCTCCTTAAACGCTGCTAGACACCCCGCCTCCGGGCCTGGGGGGTCTAGGAAAACGCTCCAGGCCCGGAG CATTCCCCCAGACCCCACGG
Downstream 100 bases:
>100_bases GCTTTTCTTCGGGGCCTTCCTTAACCAGGCCTTAACCGACAGGATGGTACAACAAAGGCAAAGGAGGTGCAGGTATGAGG AAAGGGTTGTGGCTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP
Sequences:
>Translated_472_residues MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP >Mature_472_residues MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLPAAEAVRERLPGFPLLFAFLG TAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYTYPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATS GRAEEVGDPYGVVARWEEVYRDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLVLDLYPARLVRREPQSVEVLR AEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERVVAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTF TLFARLTLCQKAEGKALSPLNPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52033; Mature: 52033
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLP CCCEEEECCCCHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCC AAEAVRERLPGFPLLFAFLGTAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYT HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHHHHHHCCCEEEEEEEECCCCCCCCCEEEE YPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATSGRAEEVGDPYGVVARWEEVY ECCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH RDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR CCCCHHHHHHHHEECCEEEEEECCCCCCCEEEEECCHHHHCCCCCCEEEECCCCHHHHHH KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHH LDLYPARLVRREPQSVEVLRAEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERV HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEE VAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTFTLFARLTLCQKAEGKALSPL EEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCC NPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MRRLLLSIASPAFLLAACVPTPGPRAPAGAPGVPPFPDARFALYLDPEALRQDLPTLPLP CCCEEEECCCCHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCC AAEAVRERLPGFPLLFAFLGTAPSEGYGVRLGKAVREGGALKVEVRTWGPAGPQGKVRYT HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHHHHHHCCCEEEEEEEECCCCCCCCCEEEE YPLDLRPLTDLPPFPFELVFHTPEGRVLHRERVRPPVATSGRAEEVGDPYGVVARWEEVY ECCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH RDGPYLGRNLVRLHEEAFAVFYTPEGEGSRFYLDLPPWLLRGQETPLCALTDRPPEDLAR CCCCHHHHHHHHEECCEEEEEECCCCCCCEEEEECCHHHHCCCCCCEEEECCCCHHHHHH KARGSLLGQVLTLKEVFVPLNQRHGLVERPLPPDRVPERAYVACLYGAEAPRLEALGPLV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCHH LDLYPARLVRREPQSVEVLRAEAGPTELVFQVRLHPLPLGDVPLDLYTLDPPRLPGGERV HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEE VAFPYHGFDRDPTQPRYALSLHEGPGGFFLWILQPEVHTFTLFARLTLCQKAEGKALSPL EEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCC NPPPGATCPSLPLVQASYTHRGLLGPGAPLALRLQFRSPEGWRSEPFVVTVP CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA