Click here to switch to the map view.

The map label for this gene is 55981730

Identifier: 55981730

GI number: 55981730

Start: 1648635

End: 1649099

Strand: Reverse

Name: 55981730

Synonym: TTHA1761

Alternate gene names: NA

Gene position: 1649099-1648635 (Counterclockwise)

Preceding gene: 55981731

Following gene: 55981729

Centisome position: 89.15

GC content: 67.96

Gene sequence:

>465_bases
ATGTGGGACCAGCCCAAGGTCAAGGCCTTCCGGGAAAGCCCCCTCCCCCTCGCCTTCCCCGAGGACCGGGTCGCCCTGGG
GGAGAACCTGGACCAGGCGGTGCGGCTTGGGCTCAAGCCCGAGGGGGGCTTTGCGGAAAACCCCTACGCCTTCACCGAGG
CGGACCTCCTCCGGGGAAAGGCGCTCTACCAGAGCTTCTGCGCCATCTGCCACGGGGTGAGGGGGGAAGGGGACGGGAGG
GCCATCCCCTTGGGCGTGCCCAAGCCCCGCTCCTACCACGACCCCGCCGTGCGGGACCAGCCCGAGGGCTACTTCTACTT
CGCCGCCACCAACGGCTTTGGCCGCATGCTTCCTTATAAGAGCCGGATCCCCGAGCGGGAGCGCTGGCTCATCGCCCACT
ACATCAAGCGGTGCCTCCTCTCGGAGGCCTGCCCTGAGGAGGTGGTGCATGCAGAGGTCCATTGA

Upstream 100 bases:

>100_bases
GCCACCCGGGACCTCCTCCGGGCCTTAGGGGCGGAGGTGGAGGAGGTGCGGCGTGCGTAGCCTTCTCTTGCTCGCCCTTC
TCCTTTCCGGGTGCGGCTGG

Downstream 100 bases:

>100_bases
GGCAAGCCGCCTGGCCCCGGGGGTGCTGGGGCTTTTGCTCTACGCCTCGGCCTTCCTCTTCGGCGCGCCCGCCGCCTACT
TCCCCTTCGCCTTCTTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MWDQPKVKAFRESPLPLAFPEDRVALGENLDQAVRLGLKPEGGFAENPYAFTEADLLRGKALYQSFCAICHGVRGEGDGR
AIPLGVPKPRSYHDPAVRDQPEGYFYFAATNGFGRMLPYKSRIPERERWLIAHYIKRCLLSEACPEEVVHAEVH

Sequences:

>Translated_154_residues
MWDQPKVKAFRESPLPLAFPEDRVALGENLDQAVRLGLKPEGGFAENPYAFTEADLLRGKALYQSFCAICHGVRGEGDGR
AIPLGVPKPRSYHDPAVRDQPEGYFYFAATNGFGRMLPYKSRIPERERWLIAHYIKRCLLSEACPEEVVHAEVH
>Mature_154_residues
MWDQPKVKAFRESPLPLAFPEDRVALGENLDQAVRLGLKPEGGFAENPYAFTEADLLRGKALYQSFCAICHGVRGEGDGR
AIPLGVPKPRSYHDPAVRDQPEGYFYFAATNGFGRMLPYKSRIPERERWLIAHYIKRCLLSEACPEEVVHAEVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17385; Mature: 17385

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDQPKVKAFRESPLPLAFPEDRVALGENLDQAVRLGLKPEGGFAENPYAFTEADLLRGK
CCCCCCHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALYQSFCAICHGVRGEGDGRAIPLGVPKPRSYHDPAVRDQPEGYFYFAATNGFGRMLPYK
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHH
SRIPERERWLIAHYIKRCLLSEACPEEVVHAEVH
HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MWDQPKVKAFRESPLPLAFPEDRVALGENLDQAVRLGLKPEGGFAENPYAFTEADLLRGK
CCCCCCHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALYQSFCAICHGVRGEGDGRAIPLGVPKPRSYHDPAVRDQPEGYFYFAATNGFGRMLPYK
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHH
SRIPERERWLIAHYIKRCLLSEACPEEVVHAEVH
HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA