| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55981721
Identifier: 55981721
GI number: 55981721
Start: 1640186
End: 1641208
Strand: Reverse
Name: 55981721
Synonym: TTHA1752
Alternate gene names: NA
Gene position: 1641208-1640186 (Counterclockwise)
Preceding gene: 55981722
Following gene: 55981720
Centisome position: 88.73
GC content: 73.51
Gene sequence:
>1023_bases ATGTTCGGCCTCGGGTGGCTTAGGGCCCTGACCGACGCCCGGGGGCTTCTGGAGCACGCCCACCACGGGGTGCCCAGGCT CGGCGAGGGGTACACCACGGACGACAACGCCCGGGCCCTCCTCTACCTCAGCCTCCTCCCCGAGGGGGCCCGGGACGAGG GGCTCGTGCGGACCTACCTCGCCTTCCTCCTCCACATGCAGAAGGAGGACGGCCGCTTCCGGAACGGCCTCACCCTGGAC GGCCGCTTTGAGGACGAGGGGGAGGCGGAGGACCCCACGGGCCGGGCCGTCCTCGCCCTCGCCGCCGCCCAGAGGCTTCC TCCCCCCTACGCGGGCCCTGCCCGGGAGGCCCTTCTCCGGGCCCTTCCCGCCCTCGAGGGCTTCACCTCCTTGAGGGGGC GGGCCTACGCCCTCCTCGGCCTTCTCGCCCTGCCCAAGGAGCCCTTCCTCGAGGCGGCCGAGGCCCTGGGGGAGGGGCTC CTTCGCGCCTTCCGGGAGGCCGAGCCCGCCTGGCCCTACCCCGGCCCCCTCACCTACGCCAACCACCGCCCCGTGGAGGC CCTGTACGCCTACGGCCTCGCCTTCCGCCGCCGAGAGGCGGTGGCCCTGGCCCGGAGGGCCCTCGCCTTCCTCAAGGAGC ACTACTTCACCCCGGGGGAGGAGGGCCTCTTCTTTGACCCCGTGGGCAACCGCTTCATGGAGCGGGGAGGGGAGAAGCCC CTCTTTGACCAGCAGCCCATTGAGGCCAAGTGCGCCCTCCTCGCCCACCTGCGCTTCGGGGAGCGGGTCCTCGCCGAGGT GGCCTTCCTCTGGTTCCACGGGCGGAACCGCCTCCGTGCCCCCCTGGTGGACGCCTTCGGCCCCATGGACGGCCTCACCC CCCACGGCCCCAACCAAAACCGCGGGGCGGAGGCCCTCCTCGCCTACCTCCTCGCCTGGCAGGCCCTGGTCCAAGGGGTC TTCCCCCAGGTGGACGAGGGCGTGGCCCTGGGGCGGGTCTTCGCCTTGGGAGGGCGGCCGTGA
Upstream 100 bases:
>100_bases CGCCTAAGGGAGATGGAGGAGCGGGCCTACGCTTACGCCCGGGACTTCACCTGGCCCAGGGTGGCCCGGGCCTACCGGCG GCTTTTGGAGGAGGTGGCGG
Downstream 100 bases:
>100_bases GGGTGGCCATGCTGGCCCCCATCGCCTGGCGGGTTCCCCCCAGGCGGTACGGCCCCTGGGAACAGGTGGTCTACGACCTC ACCGAGGCCCTTCTGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase Group I
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFGLGWLRALTDARGLLEHAHHGVPRLGEGYTTDDNARALLYLSLLPEGARDEGLVRTYLAFLLHMQKEDGRFRNGLTLD GRFEDEGEAEDPTGRAVLALAAAQRLPPPYAGPAREALLRALPALEGFTSLRGRAYALLGLLALPKEPFLEAAEALGEGL LRAFREAEPAWPYPGPLTYANHRPVEALYAYGLAFRRREAVALARRALAFLKEHYFTPGEEGLFFDPVGNRFMERGGEKP LFDQQPIEAKCALLAHLRFGERVLAEVAFLWFHGRNRLRAPLVDAFGPMDGLTPHGPNQNRGAEALLAYLLAWQALVQGV FPQVDEGVALGRVFALGGRP
Sequences:
>Translated_340_residues MFGLGWLRALTDARGLLEHAHHGVPRLGEGYTTDDNARALLYLSLLPEGARDEGLVRTYLAFLLHMQKEDGRFRNGLTLD GRFEDEGEAEDPTGRAVLALAAAQRLPPPYAGPAREALLRALPALEGFTSLRGRAYALLGLLALPKEPFLEAAEALGEGL LRAFREAEPAWPYPGPLTYANHRPVEALYAYGLAFRRREAVALARRALAFLKEHYFTPGEEGLFFDPVGNRFMERGGEKP LFDQQPIEAKCALLAHLRFGERVLAEVAFLWFHGRNRLRAPLVDAFGPMDGLTPHGPNQNRGAEALLAYLLAWQALVQGV FPQVDEGVALGRVFALGGRP >Mature_340_residues MFGLGWLRALTDARGLLEHAHHGVPRLGEGYTTDDNARALLYLSLLPEGARDEGLVRTYLAFLLHMQKEDGRFRNGLTLD GRFEDEGEAEDPTGRAVLALAAAQRLPPPYAGPAREALLRALPALEGFTSLRGRAYALLGLLALPKEPFLEAAEALGEGL LRAFREAEPAWPYPGPLTYANHRPVEALYAYGLAFRRREAVALARRALAFLKEHYFTPGEEGLFFDPVGNRFMERGGEKP LFDQQPIEAKCALLAHLRFGERVLAEVAFLWFHGRNRLRAPLVDAFGPMDGLTPHGPNQNRGAEALLAYLLAWQALVQGV FPQVDEGVALGRVFALGGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37452; Mature: 37452
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLGWLRALTDARGLLEHAHHGVPRLGEGYTTDDNARALLYLSLLPEGARDEGLVRTYL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH AFLLHMQKEDGRFRNGLTLDGRFEDEGEAEDPTGRAVLALAAAQRLPPPYAGPAREALLR HHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ALPALEGFTSLRGRAYALLGLLALPKEPFLEAAEALGEGLLRAFREAEPAWPYPGPLTYA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NHRPVEALYAYGLAFRRREAVALARRALAFLKEHYFTPGEEGLFFDPVGNRFMERGGEKP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCC LFDQQPIEAKCALLAHLRFGERVLAEVAFLWFHGRNRLRAPLVDAFGPMDGLTPHGPNQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCC RGAEALLAYLLAWQALVQGVFPQVDEGVALGRVFALGGRP HHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHEECCCCC >Mature Secondary Structure MFGLGWLRALTDARGLLEHAHHGVPRLGEGYTTDDNARALLYLSLLPEGARDEGLVRTYL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH AFLLHMQKEDGRFRNGLTLDGRFEDEGEAEDPTGRAVLALAAAQRLPPPYAGPAREALLR HHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ALPALEGFTSLRGRAYALLGLLALPKEPFLEAAEALGEGLLRAFREAEPAWPYPGPLTYA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NHRPVEALYAYGLAFRRREAVALARRALAFLKEHYFTPGEEGLFFDPVGNRFMERGGEKP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCC LFDQQPIEAKCALLAHLRFGERVLAEVAFLWFHGRNRLRAPLVDAFGPMDGLTPHGPNQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCC RGAEALLAYLLAWQALVQGVFPQVDEGVALGRVFALGGRP HHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA