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The map label for this gene is nifU [H]

Identifier: 55981705

GI number: 55981705

Start: 1627650

End: 1628066

Strand: Direct

Name: nifU [H]

Synonym: TTHA1736

Alternate gene names: 55981705

Gene position: 1627650-1628066 (Clockwise)

Preceding gene: 55981704

Following gene: 55981706

Centisome position: 87.99

GC content: 67.63

Gene sequence:

>417_bases
ATGAGCGTCCTTGACGAGCTTTACCGGGAAATCCTCCTGGACCACTACCAGAGCCCCAGGAACTTCGGGGTCCTGCCCCA
GGCCACCAAGCAGGCCGGGGGGATGAACCCCTCCTGCGGGGACCAGGTGGAGGTGATGGTGCTCCTGGAAGGGGACACCA
TCGCCGACATCCGCTTCCAAGGCCAAGGGTGCGCCATCAGCACGGCGAGCGCCTCCCTCATGACCGAGGCGGTGAAGGGC
AAAAAGGTGGCGGAGGCCCTGGAGCTTTCCCGCAAGTTCCAGGCCATGGTGGTGGAAGGCGCCCCCCCGGACCCCACCTT
GGGCGACCTCCTCGCCCTCCAGGGGGTGGCCAAGCTCCCCGCCCGGGTGAAGTGCGCTACCCTGGCCTGGCACGCCCTGG
AGGAGGCCCTAAGGTGA

Upstream 100 bases:

>100_bases
GCGAGCTTCTACCTCTACAACACGAAGGAAGAGGTGGACCGCTTCGTGGAAGCCCTTCTAAGGATAGAGGCCAAGTACCG
GGCCTGGCTATAATGGACCA

Downstream 100 bases:

>100_bases
AGCGCTACCCGGCCCACAAGGTGACCCCCCTTCTGGTCCAGCACCCCGACCTCATGGAGGCCTGGAAGGAGGCGGCCCAG
GAGGGCAGGATCCGGGCCAA

Product: iron-sulfur cluster biosynthesis protein IscU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKG
KKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR

Sequences:

>Translated_138_residues
MSVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKG
KKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR
>Mature_137_residues
SVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKGK
KVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=93, Percent_Identity=41.9354838709677, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI24307953, Length=84, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI1788878, Length=135, Percent_Identity=34.8148148148148, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14779; Mature: 14648

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEC
GQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCC
ARVKCATLAWHALEEALR
CHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SVLDELYREILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIADIRFQ
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEC
GQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLP
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCC
ARVKCATLAWHALEEALR
CHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]