Click here to switch to the map view.

The map label for this gene is dsbE [H]

Identifier: 55981697

GI number: 55981697

Start: 1621420

End: 1621950

Strand: Direct

Name: dsbE [H]

Synonym: TTHA1728

Alternate gene names: 55981697

Gene position: 1621420-1621950 (Clockwise)

Preceding gene: 55981696

Following gene: 55981699

Centisome position: 87.66

GC content: 63.47

Gene sequence:

>531_bases
ATGCGCTTCGGGATCGTCCTTGCCCTCTTGGTTTTGGTGGCCGGGCTCTTCCTTTTCGGATTGCGCCGGGATCCCTCCCT
CCTCCCCTCGGTGCTGGCGGAAAAGCGCAAGCCCGCCCCCGACTTCACGCTTCCGATCCTTCCCCCCTACCGCAAAGCTT
GGGGAGAAACGCTCCGGCTTTCCCGGCTCTTCGGCCGGCCTATCGTCCTTAACTTCTGGGCCAGCTGGTGCCCCCCCTGC
CGCCGGGAGGCTCCGATGCTGGAAGCCTATTGGCGACGGTACCAGGACCAGGTGCTCTTCATTGGCGTAAACTTCCAGGA
CACTGAGGAAGCCGCCCTGGCCTTCATCCGGGAGTTTGGCCTGAGTTTTCCCAGCGTGGCCGATCCCAGGGGCCGGGTGG
GGATTGACTATGGGGTCTACGGCCTTCCCGAAACCTTTTTCATAGACCCGGAGGGCCGCGTCCAGGCCCGTCACGTGGGG
GAGCTTAAGCCCAAGGACCTTGAAGGCTACCTCCGGACCCTCCTTCCTTGA

Upstream 100 bases:

>100_bases
TCAAAAGGCTAGGAAAGGTGAGCGGGCAGCTAGCGGGCGGGCTCTTCCTTATGGCCGGGCTTTACGACACGGTGGTCTAC
TGGTTCCTTTAGGGGGTTCT

Downstream 100 bases:

>100_bases
AGGCGAGCCCCGCCACGTGAGGGGCCACCACGGGAAGGGGGAGGGGAAAGGCTTCCGCCTCCACCCGGGGAAAGCGGGCC
TGGATTAGGGCGAGGGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRFGIVLALLVLVAGLFLFGLRRDPSLLPSVLAEKRKPAPDFTLPILPPYRKAWGETLRLSRLFGRPIVLNFWASWCPPC
RREAPMLEAYWRRYQDQVLFIGVNFQDTEEAALAFIREFGLSFPSVADPRGRVGIDYGVYGLPETFFIDPEGRVQARHVG
ELKPKDLEGYLRTLLP

Sequences:

>Translated_176_residues
MRFGIVLALLVLVAGLFLFGLRRDPSLLPSVLAEKRKPAPDFTLPILPPYRKAWGETLRLSRLFGRPIVLNFWASWCPPC
RREAPMLEAYWRRYQDQVLFIGVNFQDTEEAALAFIREFGLSFPSVADPRGRVGIDYGVYGLPETFFIDPEGRVQARHVG
ELKPKDLEGYLRTLLP
>Mature_176_residues
MRFGIVLALLVLVAGLFLFGLRRDPSLLPSVLAEKRKPAPDFTLPILPPYRKAWGETLRLSRLFGRPIVLNFWASWCPPC
RREAPMLEAYWRRYQDQVLFIGVNFQDTEEAALAFIREFGLSFPSVADPRGRVGIDYGVYGLPETFFIDPEGRVQARHVG
ELKPKDLEGYLRTLLP

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=176, Percent_Identity=33.5227272727273, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20121; Mature: 20121

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFGIVLALLVLVAGLFLFGLRRDPSLLPSVLAEKRKPAPDFTLPILPPYRKAWGETLRL
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SRLFGRPIVLNFWASWCPPCRREAPMLEAYWRRYQDQVLFIGVNFQDTEEAALAFIREFG
HHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHC
LSFPSVADPRGRVGIDYGVYGLPETFFIDPEGRVQARHVGELKPKDLEGYLRTLLP
CCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCEEHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRFGIVLALLVLVAGLFLFGLRRDPSLLPSVLAEKRKPAPDFTLPILPPYRKAWGETLRL
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SRLFGRPIVLNFWASWCPPCRREAPMLEAYWRRYQDQVLFIGVNFQDTEEAALAFIREFG
HHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHC
LSFPSVADPRGRVGIDYGVYGLPETFFIDPEGRVQARHVGELKPKDLEGYLRTLLP
CCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCEEHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA