| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981695
Identifier: 55981695
GI number: 55981695
Start: 1619847
End: 1620599
Strand: Direct
Name: 55981695
Synonym: TTHA1726
Alternate gene names: NA
Gene position: 1619847-1620599 (Clockwise)
Preceding gene: 55981694
Following gene: 55981696
Centisome position: 87.57
GC content: 69.46
Gene sequence:
>753_bases ATGCGGCGCCTCCTCACCCTCTGGGTTTTGGGACTGGGCGCCCTGGCCCAGGTTCCCGTGGGCCAGGTGGCCACCCGGGA CGTCCACGCCCTCCTCTGGCTTCCCGACGGCCGCCTCCTCTTCGGCCACCACGACGGCCTCCAGGTCTCCGAGGACGAAG GCCGGACCTGGCGGGACCTGGTGCGCAAAACGGGCTTTGACGCCATGGCCCTCGTTCTGGAGGGGGACCGCCTCCTCGCC GCCGGACACTGGGTGCTTTCGGAAAGCCGAGACGGGGGCAAAACCTGGCGGAGCCTCCGCCCCAGGGGGCTTCCCGCCCT GGACCTCCACGGCTACGCCGCCTCAGGGGGCCTCCACTTCGCCCTCGAGGCCACCCACGGCTACTTCGTAAGCGAAGACG GCGGGAAAACCTTCAAGTCCACCGCCCCTAAAGGGCTTCCCAAGGCGGGCATGGCGGCCATGGTCTTCCAGGGGAAGACC CTTTACGTGGCCCCCATGGGCCAGGGCCTCTACCAAAGCTCCGACGGCGGCCGGACCTTCACCCAGGTGCCGACCCCAGA GCGGGAGATCTACGCCCTCGCGACAGGGGCGGGGACCCTTTATCTGGGAGGGAAGACGGGCCTCTGGCAGAGGACCCCGG CGGGCTGGAAAAGGCTCTGGCAGGGCGCGGTCCTGGCCCTCGCCGCCCATCCCCAGGAGGCGGGAAGGCTCGTCTTCATA GATGGCCAGGGACGGGTGTGGAAGCTCCCATGA
Upstream 100 bases:
>100_bases CGAGGTCCGCCAGGGGGACTGGGTGGCCCAAGGTGCCCTCACCACCTTCGCCCAAAGCCCCACCTGCCTCACGGAGCTAA GGCTTTCCCGGAGGTGAGGG
Downstream 100 bases:
>100_bases GGGCACGGGGCCTTCTTCCCTGGCTAGCCCTGGCGGGGCTTTTGAGCCTCCTTCTCCTGCTGGGCCCCTGGCTTGCCCCG CTGGCAGGGGCCCTCTACGG
Product: S-layer repressor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRRLLTLWVLGLGALAQVPVGQVATRDVHALLWLPDGRLLFGHHDGLQVSEDEGRTWRDLVRKTGFDAMALVLEGDRLLA AGHWVLSESRDGGKTWRSLRPRGLPALDLHGYAASGGLHFALEATHGYFVSEDGGKTFKSTAPKGLPKAGMAAMVFQGKT LYVAPMGQGLYQSSDGGRTFTQVPTPEREIYALATGAGTLYLGGKTGLWQRTPAGWKRLWQGAVLALAAHPQEAGRLVFI DGQGRVWKLP
Sequences:
>Translated_250_residues MRRLLTLWVLGLGALAQVPVGQVATRDVHALLWLPDGRLLFGHHDGLQVSEDEGRTWRDLVRKTGFDAMALVLEGDRLLA AGHWVLSESRDGGKTWRSLRPRGLPALDLHGYAASGGLHFALEATHGYFVSEDGGKTFKSTAPKGLPKAGMAAMVFQGKT LYVAPMGQGLYQSSDGGRTFTQVPTPEREIYALATGAGTLYLGGKTGLWQRTPAGWKRLWQGAVLALAAHPQEAGRLVFI DGQGRVWKLP >Mature_250_residues MRRLLTLWVLGLGALAQVPVGQVATRDVHALLWLPDGRLLFGHHDGLQVSEDEGRTWRDLVRKTGFDAMALVLEGDRLLA AGHWVLSESRDGGKTWRSLRPRGLPALDLHGYAASGGLHFALEATHGYFVSEDGGKTFKSTAPKGLPKAGMAAMVFQGKT LYVAPMGQGLYQSSDGGRTFTQVPTPEREIYALATGAGTLYLGGKTGLWQRTPAGWKRLWQGAVLALAAHPQEAGRLVFI DGQGRVWKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27075; Mature: 27075
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLTLWVLGLGALAQVPVGQVATRDVHALLWLPDGRLLFGHHDGLQVSEDEGRTWRDL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEECCCCCHHHHH VRKTGFDAMALVLEGDRLLAAGHWVLSESRDGGKTWRSLRPRGLPALDLHGYAASGGLHF HHHCCCCEEEEEEECCEEEEECEEEEECCCCCCHHHHHCCCCCCCEEEECCEEECCCEEE ALEATHGYFVSEDGGKTFKSTAPKGLPKAGMAAMVFQGKTLYVAPMGQGLYQSSDGGRTF EEEECCCEEEECCCCCEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEECCCCCEEE TQVPTPEREIYALATGAGTLYLGGKTGLWQRTPAGWKRLWQGAVLALAAHPQEAGRLVFI EECCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCEEEEE DGQGRVWKLP CCCCEEEECC >Mature Secondary Structure MRRLLTLWVLGLGALAQVPVGQVATRDVHALLWLPDGRLLFGHHDGLQVSEDEGRTWRDL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEECCCCCHHHHH VRKTGFDAMALVLEGDRLLAAGHWVLSESRDGGKTWRSLRPRGLPALDLHGYAASGGLHF HHHCCCCEEEEEEECCEEEEECEEEEECCCCCCHHHHHCCCCCCCEEEECCEEECCCEEE ALEATHGYFVSEDGGKTFKSTAPKGLPKAGMAAMVFQGKTLYVAPMGQGLYQSSDGGRTF EEEECCCEEEECCCCCEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEECCCCCEEE TQVPTPEREIYALATGAGTLYLGGKTGLWQRTPAGWKRLWQGAVLALAAHPQEAGRLVFI EECCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCEEEEE DGQGRVWKLP CCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA