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The map label for this gene is 55981628

Identifier: 55981628

GI number: 55981628

Start: 1572948

End: 1574309

Strand: Reverse

Name: 55981628

Synonym: TTHA1659

Alternate gene names: NA

Gene position: 1574309-1572948 (Counterclockwise)

Preceding gene: 55981630

Following gene: 55981627

Centisome position: 85.11

GC content: 74.08

Gene sequence:

>1362_bases
ATGGGACCTTTTCTGATGCGTATCCTCGCCCTCGGGCTCGTGGCTGGGGCGGCCTTGGCCCAGGGCGTCCAAGCCTGGCT
GGAGAGGGGGGAGCGCCTCCTTTCGGAGGGGGCCTACGCGGAGGCCGTGGCCGCCTTTGAGGAGGTGCTGCGCCAGGACT
ACGGTCAGTTCCAGGCCCACCTCGGCCTCGGCGTGGCCTTGGTGCGGCTTGGCCGGCTGGAAGAGGCCCGGTTCGCCTTT
GACCAGATGACCCGGGTCTTCCCGGACCGGTACGAGGGGCACTTCAACCTGGGCCAGGTCTACCTCCGCCTGGGGGAGGC
GGGAAAGGCGGCCGAGGCCTTCGCCAAAGCGGCCGCCATCGCCCCCCGGGAGGAGGCCTACCTCGCCTGGTCCGGGGCCC
TCCTCCAGGAGGGGAAGGCCAGGGAGGCGGCGGCCGTTCTGGAGCGGGGCCTTTCCCCGGAGCGGAGCCCCGCCTACCGC
CTCGCCCTGGCCCAGGCCCTCTACGCCGCCGGGGAGCGGGAGGCGGCGGTGCCCCACCTGTACGCCGCGCTCAACCGGGA
GCCTGGCCGGGCGGAGGCCTGGGACCTCCTCGCCCGGGTGCTGGCGGAGGTGGGGCTTACGGACCGGGCGCGCCGGGAGG
TGGAGCGGGGCCTCGAGGCGGTCCAGGACCCCAAGGGGAAGGCCCTCCTCCTCCTGCGCAAGGGAACCCTGGTGGAAGAC
CCCGAGCCCCTTTGGCGGGAGGCCTTGGCCTTGGACCCGGACCTTTGGCAGGCCGCCTACCTCCTGGGCCGGCGCCGGCT
TGAGGCGGGGGACCTGAAGGAGGGGCTCCGCTGGCTCCAGGAGGCCTACGCCAAGGGCCAGGATCCCGAGGTGGCCTTGG
CCTTGGCGGCCGCTTACCTCAAGGCCAAGGACTACGCCAACGCTTACCGCTACGCCAAGGAGGCCGGGCCCGCCGGGGCC
TTCCTCCAGGCCCAGGCGGCCCAAGGCCTAGGACGGCGGCAGGAGGCCCTAAAGCTCCTCGAGGGGCTCGCCTCGCCCCA
GGCCCTGGCCTTGCGGGGAAGCCTCCTCCTGGAGGAGGGCCAGGGCGAGGAGGCGGTGGCGGCCCTCCAGGCCGCCTACG
AGGCCACCCGCGACCCCCAGGTGGGGGTGAACCTGGGGGCGGCCCTCGTCCTCGTCAAGCGCTTCGGCCAGGCGGAGCTC
GTGCTGCGCGAGGTCCTGGCCAAGGACCCCTCCTCCGCCGCCGCCTGGTACAACCTGGGCCTGGCCCTCCGGGGCCTGGG
CCGCCAAGCGGAGGCCGACCGGGCCCTGAGGCAGGCCGCCGCCTTGGGCTCGAGGGAGGCCCGGGCCCTTCTCGGGAGGT
AG

Upstream 100 bases:

>100_bases
TCGTAGGCGGCGTTGAGGACCAGGACCCGTGGGGCGTCCAGGTTCACGGCCTCAGCTTAGCACAGGGGTGTGCTATGCTA
GCGGCAAAGAGGGGGCTTCT

Downstream 100 bases:

>100_bases
GATGCGCTGGCTAAGGGAGAACTGGCTGGACTTTCTCATCTTCGTCCTCATCGCCGTGGTGGCGGTGGGCGTGGTCCTCT
ACCTCGTGGGCCTAAACCCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat-Containing Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MGPFLMRILALGLVAGAALAQGVQAWLERGERLLSEGAYAEAVAAFEEVLRQDYGQFQAHLGLGVALVRLGRLEEARFAF
DQMTRVFPDRYEGHFNLGQVYLRLGEAGKAAEAFAKAAAIAPREEAYLAWSGALLQEGKAREAAAVLERGLSPERSPAYR
LALAQALYAAGEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGKALLLLRKGTLVED
PEPLWREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAYAKGQDPEVALALAAAYLKAKDYANAYRYAKEAGPAGA
FLQAQAAQGLGRRQEALKLLEGLASPQALALRGSLLLEEGQGEEAVAALQAAYEATRDPQVGVNLGAALVLVKRFGQAEL
VLREVLAKDPSSAAAWYNLGLALRGLGRQAEADRALRQAAALGSREARALLGR

Sequences:

>Translated_453_residues
MGPFLMRILALGLVAGAALAQGVQAWLERGERLLSEGAYAEAVAAFEEVLRQDYGQFQAHLGLGVALVRLGRLEEARFAF
DQMTRVFPDRYEGHFNLGQVYLRLGEAGKAAEAFAKAAAIAPREEAYLAWSGALLQEGKAREAAAVLERGLSPERSPAYR
LALAQALYAAGEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGKALLLLRKGTLVED
PEPLWREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAYAKGQDPEVALALAAAYLKAKDYANAYRYAKEAGPAGA
FLQAQAAQGLGRRQEALKLLEGLASPQALALRGSLLLEEGQGEEAVAALQAAYEATRDPQVGVNLGAALVLVKRFGQAEL
VLREVLAKDPSSAAAWYNLGLALRGLGRQAEADRALRQAAALGSREARALLGR
>Mature_452_residues
GPFLMRILALGLVAGAALAQGVQAWLERGERLLSEGAYAEAVAAFEEVLRQDYGQFQAHLGLGVALVRLGRLEEARFAFD
QMTRVFPDRYEGHFNLGQVYLRLGEAGKAAEAFAKAAAIAPREEAYLAWSGALLQEGKAREAAAVLERGLSPERSPAYRL
ALAQALYAAGEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGKALLLLRKGTLVEDP
EPLWREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAYAKGQDPEVALALAAAYLKAKDYANAYRYAKEAGPAGAF
LQAQAAQGLGRRQEALKLLEGLASPQALALRGSLLLEEGQGEEAVAALQAAYEATRDPQVGVNLGAALVLVKRFGQAELV
LREVLAKDPSSAAAWYNLGLALRGLGRQAEADRALRQAAALGSREARALLGR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48898; Mature: 48767

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPFLMRILALGLVAGAALAQGVQAWLERGERLLSEGAYAEAVAAFEEVLRQDYGQFQAH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LGLGVALVRLGRLEEARFAFDQMTRVFPDRYEGHFNLGQVYLRLGEAGKAAEAFAKAAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC
APREEAYLAWSGALLQEGKAREAAAVLERGLSPERSPAYRLALAQALYAAGEREAAVPHL
CCCHHHHHEEHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
YAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGKALLLLRKGTLVED
HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PEPLWREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAYAKGQDPEVALALAAAYL
CCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KAKDYANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALKLLEGLASPQALALRGSLLLEEG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
QGEEAVAALQAAYEATRDPQVGVNLGAALVLVKRFGQAELVLREVLAKDPSSAAAWYNLG
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH
LALRGLGRQAEADRALRQAAALGSREARALLGR
HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
GPFLMRILALGLVAGAALAQGVQAWLERGERLLSEGAYAEAVAAFEEVLRQDYGQFQAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LGLGVALVRLGRLEEARFAFDQMTRVFPDRYEGHFNLGQVYLRLGEAGKAAEAFAKAAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC
APREEAYLAWSGALLQEGKAREAAAVLERGLSPERSPAYRLALAQALYAAGEREAAVPHL
CCCHHHHHEEHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
YAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGKALLLLRKGTLVED
HHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PEPLWREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAYAKGQDPEVALALAAAYL
CCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KAKDYANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALKLLEGLASPQALALRGSLLLEEG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
QGEEAVAALQAAYEATRDPQVGVNLGAALVLVKRFGQAELVLREVLAKDPSSAAAWYNLG
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH
LALRGLGRQAEADRALRQAAALGSREARALLGR
HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA