| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is malF [H]
Identifier: 55981620
GI number: 55981620
Start: 1565794
End: 1567122
Strand: Reverse
Name: malF [H]
Synonym: TTHA1651
Alternate gene names: 55981620
Gene position: 1567122-1565794 (Counterclockwise)
Preceding gene: 55981621
Following gene: 55981619
Centisome position: 84.72
GC content: 67.04
Gene sequence:
>1329_bases ATGAAGCACCCTCCCGGACTCAAAGGCTTCCTCCTGGCCATGGGGCTTCTTCTGGGCCTCCTCCTCGTGGCCACGGGGCT AGGGCTCGCCGCTTACCTCGCCCTTTCCGCCCGCCTGGATCTTCCCGGGTGGTCCGTCCTCGTCTTCGCCCTCCTCGTCC TCGTCCCCGGGGCGGTGGCGGTGGGGCGGCTCTTCCCCTGGCTCACCGACTGGTACTACTTCCTCCCCGCCCTAGCCTTC CTCCTCGTCTTCACCCTGTACCCCATCGGCCTCACGGTCTACCTGGCCTTCACCGACTACTCGGGGAAGCGGAACGGCTT CCCCGACCGCTCCACCGAGACCCGGGTGGTGGCCCATGAGGGGGCGCGGCTCGTCCTCGAGGCCGAGGCCCAAGAGGCCC TCCGCTGCGACCCTTGCGTGGGGGAGGTCGTGGAGGCCTACGCCGAAGGGCAGAGGGCCCGGGCCCGGATCCAGGCCGTG GAAGGGGCCACCCTCCTCCTGGACCGGGCTTTGCCCTTCACGCCCGCGTACGTGGCCCGGGTCAACGCCTTCCACTTCGT GGGGTTCAAGAACTTCGCCTTCATCCTCTCCCAGGCCAACCAGGCCCTCTTTCCCGTCTTCCTCTGGAACCTCGTCTTCG CCTTGGCCACGGTGGTCCTGAACGGCCTCGTGGGGCTCGTCCTCGGGCTTGTGCTCAACAACCGGGCCCTGAAGCTCCGC AACCTCTACCGCACCCTCCTCATCGTCTCCTGGGCCCTGCCCGGGGTCATCACCGTCCAGGTCTGGGTGGCCCTCCTCAA CTACAACTTCGGGGCCATCAACCGCCTTCTCGGGGTCCTGGGCATCTACCCCATCCCCTGGCTCAACGACCCCGACTGGG CCAAGGTGGCCGTCCTCCTCGTCAACCTCTGGCTCGGCTTTCCCTACATGATGACGGCCACCTTAGGGGCCCTTTCCACC ATCCCCGACGAGCTCTACGAGGCGGCCAAGGTGGACGGGGCCACCCCATGGCAGGCCCTCTTCCGCATCACCCTTCCTCT CCTGGAGAAGCCCATGCTGCCTATTCTCCTCTCCGCCTTCGCCTTCAACTTCAACAACTTCTACCTCATCTACCTCCTCA CCGGGGGCGGCCCGGCCCAAGAGGGCAGGCTCGCCACGGCCCAGGCCACGGACATCCTCATCTCCTGGGCCTACAAGACG GCCTTCAGCGCCGAGGGGCAGTCGGCCTACGGCCTGGGGGCGGCGATTAGCCTCCTCATCTTCGCCATCACCGTGGCCAT AAGCCTGGTGAACTTCCGGGTGACCGGGGCGCTTCGGGAGGTGAGGTAG
Upstream 100 bases:
>100_bases AGGACATGGTGGCCGAGATCAAGAAGGCCATCGGCAGGTAACCCCTATGGACGCTCCCCACGGGACCTCCCGCTTCCCGT GGGGGGCGTATCTTTAGACC
Downstream 100 bases:
>100_bases ATGCGCAAGCTCGTGGCCTTCCTCCTCACGGGCCTCGCCCTCTACGGGGCCTACTGGTTCGCGGCGAACCGCCTCTTTGA CGAGGGGTCCTACCGCAAGC
Product: maltose ABC transporter permease
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKHPPGLKGFLLAMGLLLGLLLVATGLGLAAYLALSARLDLPGWSVLVFALLVLVPGAVAVGRLFPWLTDWYYFLPALAF LLVFTLYPIGLTVYLAFTDYSGKRNGFPDRSTETRVVAHEGARLVLEAEAQEALRCDPCVGEVVEAYAEGQRARARIQAV EGATLLLDRALPFTPAYVARVNAFHFVGFKNFAFILSQANQALFPVFLWNLVFALATVVLNGLVGLVLGLVLNNRALKLR NLYRTLLIVSWALPGVITVQVWVALLNYNFGAINRLLGVLGIYPIPWLNDPDWAKVAVLLVNLWLGFPYMMTATLGALST IPDELYEAAKVDGATPWQALFRITLPLLEKPMLPILLSAFAFNFNNFYLIYLLTGGGPAQEGRLATAQATDILISWAYKT AFSAEGQSAYGLGAAISLLIFAITVAISLVNFRVTGALREVR
Sequences:
>Translated_442_residues MKHPPGLKGFLLAMGLLLGLLLVATGLGLAAYLALSARLDLPGWSVLVFALLVLVPGAVAVGRLFPWLTDWYYFLPALAF LLVFTLYPIGLTVYLAFTDYSGKRNGFPDRSTETRVVAHEGARLVLEAEAQEALRCDPCVGEVVEAYAEGQRARARIQAV EGATLLLDRALPFTPAYVARVNAFHFVGFKNFAFILSQANQALFPVFLWNLVFALATVVLNGLVGLVLGLVLNNRALKLR NLYRTLLIVSWALPGVITVQVWVALLNYNFGAINRLLGVLGIYPIPWLNDPDWAKVAVLLVNLWLGFPYMMTATLGALST IPDELYEAAKVDGATPWQALFRITLPLLEKPMLPILLSAFAFNFNNFYLIYLLTGGGPAQEGRLATAQATDILISWAYKT AFSAEGQSAYGLGAAISLLIFAITVAISLVNFRVTGALREVR >Mature_442_residues MKHPPGLKGFLLAMGLLLGLLLVATGLGLAAYLALSARLDLPGWSVLVFALLVLVPGAVAVGRLFPWLTDWYYFLPALAF LLVFTLYPIGLTVYLAFTDYSGKRNGFPDRSTETRVVAHEGARLVLEAEAQEALRCDPCVGEVVEAYAEGQRARARIQAV EGATLLLDRALPFTPAYVARVNAFHFVGFKNFAFILSQANQALFPVFLWNLVFALATVVLNGLVGLVLGLVLNNRALKLR NLYRTLLIVSWALPGVITVQVWVALLNYNFGAINRLLGVLGIYPIPWLNDPDWAKVAVLLVNLWLGFPYMMTATLGALST IPDELYEAAKVDGATPWQALFRITLPLLEKPMLPILLSAFAFNFNNFYLIYLLTGGGPAQEGRLATAQATDILISWAYKT AFSAEGQSAYGLGAAISLLIFAITVAISLVNFRVTGALREVR
Specific function: Part of the binding-protein-dependent transport system for maltose; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side. Note=A substantial portion of it protrudes into the periplasmic space [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=43.6507936507937, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1787570, Length=249, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789861, Length=251, Percent_Identity=26.2948207171315, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 48223; Mature: 48223
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPPGLKGFLLAMGLLLGLLLVATGLGLAAYLALSARLDLPGWSVLVFALLVLVPGAVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHH VGRLFPWLTDWYYFLPALAFLLVFTLYPIGLTVYLAFTDYSGKRNGFPDRSTETRVVAHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEEC GARLVLEAEAQEALRCDPCVGEVVEAYAEGQRARARIQAVEGATLLLDRALPFTPAYVAR CCEEEEECCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH VNAFHFVGFKNFAFILSQANQALFPVFLWNLVFALATVVLNGLVGLVLGLVLNNRALKLR HHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NLYRTLLIVSWALPGVITVQVWVALLNYNFGAINRLLGVLGIYPIPWLNDPDWAKVAVLL HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VNLWLGFPYMMTATLGALSTIPDELYEAAKVDGATPWQALFRITLPLLEKPMLPILLSAF HHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH AFNFNNFYLIYLLTGGGPAQEGRLATAQATDILISWAYKTAFSAEGQSAYGLGAAISLLI HHCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FAITVAISLVNFRVTGALREVR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHPPGLKGFLLAMGLLLGLLLVATGLGLAAYLALSARLDLPGWSVLVFALLVLVPGAVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHH VGRLFPWLTDWYYFLPALAFLLVFTLYPIGLTVYLAFTDYSGKRNGFPDRSTETRVVAHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEEC GARLVLEAEAQEALRCDPCVGEVVEAYAEGQRARARIQAVEGATLLLDRALPFTPAYVAR CCEEEEECCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH VNAFHFVGFKNFAFILSQANQALFPVFLWNLVFALATVVLNGLVGLVLGLVLNNRALKLR HHHHEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NLYRTLLIVSWALPGVITVQVWVALLNYNFGAINRLLGVLGIYPIPWLNDPDWAKVAVLL HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VNLWLGFPYMMTATLGALSTIPDELYEAAKVDGATPWQALFRITLPLLEKPMLPILLSAF HHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH AFNFNNFYLIYLLTGGGPAQEGRLATAQATDILISWAYKTAFSAEGQSAYGLGAAISLLI HHCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FAITVAISLVNFRVTGALREVR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2674653 [H]