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The map label for this gene is ycfF [C]

Identifier: 55981586

GI number: 55981586

Start: 1532910

End: 1533242

Strand: Reverse

Name: ycfF [C]

Synonym: TTHA1617

Alternate gene names: 55981586

Gene position: 1533242-1532910 (Counterclockwise)

Preceding gene: 55981587

Following gene: 55981583

Centisome position: 82.89

GC content: 65.17

Gene sequence:

>333_bases
ATGCTTTCCATGGAGTGCGTCTTTTGCCGCATCATCGCCGGGGAACTCCCCTCCAGAAAGGTCTACGAGGACGAGGGCTT
CGTGGCCTTCCACGACATCAGGCCCAAGGCCCCGGTGCACGTCCTGGTGGTGCCCAAGGAGCACGTGGAGAAGCTCTCCG
ACTACCCCGACACCGAGGAAGGGGAGAGGAAGCTCGGGGCCCTCTTCCGCACCGCGAACCGGGTGGCGCGGCTTTTGGGC
CTTCAGGGCTACCGGGTCCAGGTGAACGTGGGGGAGAAGGGGGGGCAGGAGGTCTTCCACGTCCACGTGCACGTCATGGG
CGGATGGGGATGA

Upstream 100 bases:

>100_bases
TGGGCCCGGGTCCACGGGGTGGAGGGGTACGTCCTTTTGGGCCGGGTGGAGGGGGTGAAGGAAGGGGCCAGGGGGCCCCT
GGAGCTTCCCGTGCGGTAGG

Downstream 100 bases:

>100_bases
GGAAGCGGTCCAGGAGCTTCCCCTGGGGGTCCAGGGCGTAGCCCAAAAGGCCCTCCCGCCCCACCTCCAGGAAGAGGGCG
TGGTGGGCCACGGCCAGGGC

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLSMECVFCRIIAGELPSRKVYEDEGFVAFHDIRPKAPVHVLVVPKEHVEKLSDYPDTEEGERKLGALFRTANRVARLLG
LQGYRVQVNVGEKGGQEVFHVHVHVMGGWG

Sequences:

>Translated_110_residues
MLSMECVFCRIIAGELPSRKVYEDEGFVAFHDIRPKAPVHVLVVPKEHVEKLSDYPDTEEGERKLGALFRTANRVARLLG
LQGYRVQVNVGEKGGQEVFHVHVHVMGGWG
>Mature_110_residues
MLSMECVFCRIIAGELPSRKVYEDEGFVAFHDIRPKAPVHVLVVPKEHVEKLSDYPDTEEGERKLGALFRTANRVARLLG
LQGYRVQVNVGEKGGQEVFHVHVHVMGGWG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=45.7142857142857, Blast_Score=97, Evalue=2e-21,
Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=40.1869158878505, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=38.5321100917431, Blast_Score=80, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=43.8095238095238, Blast_Score=101, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6320078, Length=105, Percent_Identity=40.9523809523809, Blast_Score=79, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=41.6666666666667, Blast_Score=88, Evalue=9e-19,
Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=41.6666666666667, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12368; Mature: 12368

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMECVFCRIIAGELPSRKVYEDEGFVAFHDIRPKAPVHVLVVPKEHVEKLSDYPDTEE
CCCCHHHHEEEHHCCCCCCCEECCCCCEEEECCCCCCCEEEEEECHHHHHHHHCCCCCCC
GERKLGALFRTANRVARLLGLQGYRVQVNVGEKGGQEVFHVHVHVMGGWG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCC
>Mature Secondary Structure
MLSMECVFCRIIAGELPSRKVYEDEGFVAFHDIRPKAPVHVLVVPKEHVEKLSDYPDTEE
CCCCHHHHEEEHHCCCCCCCEECCCCCEEEECCCCCCCEEEEEECHHHHHHHHCCCCCCC
GERKLGALFRTANRVARLLGLQGYRVQVNVGEKGGQEVFHVHVHVMGGWG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]