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The map label for this gene is fadM [H]

Identifier: 55981548

GI number: 55981548

Start: 1502395

End: 1503318

Strand: Reverse

Name: fadM [H]

Synonym: TTHA1579

Alternate gene names: 55981548

Gene position: 1503318-1502395 (Counterclockwise)

Preceding gene: 55981549

Following gene: 55981547

Centisome position: 81.27

GC content: 67.75

Gene sequence:

>924_bases
ATGAACCTGGACCTGGCTTACCGTTCCTTCGTGCTCGGCGTGGCGGGCCACCCTCAGGTGGAGCGCCTCATCAAGCACCG
GGCGAAGGGCCTGGTGCGGCGCTACGTGGCGGGGGAGACCCTGGAGGAGGCCCTTAAGGCGGCGGAGGCCCTGGAGCGGG
AGGGCGTCCACGCCATCCTGGACCTCTTGGGCGAGATGGTGCGCACCGAGGAGGAGGCCAGGGCCTTCCAAAGGGGGCTC
CTTGAGCTCGTCTGGGCCCTTGCGGGGAAGCCCTGGCCCAAGTACATCTCCCTGAAGCTCACCCAGCTCGGCCTGGACCT
CTCCGAGGACCTCGCCCTCGCCCTTTTGCGCGAGGTCCTTAGGGAGGCCGAGCCCCGGGGGGTCTTCGTGCGCCTGGACA
TGGAGGACTCTCCCCGGGTGGAGGCCACCTTGCGCATCTACAAGGCCCTCAGGGAGGAGGGCTTCTCCCAGGTGGGGATC
GTCCTGCAAAGCTACCTCTACCGCACGGAGAAGGACCTTTTGGACCTCCTGCCCTACCGGCCCAACCTCCGCCTGGTCAA
GGGGGCCTACCGGGAGCCCAAGGAGGTGGCCTTCCCGGACAAGCGCCTCATTGACGCCGAGTACCTGCACCTGGGGAAGC
TCGCCCTTAAGGAGGGGCTTTACGTGGCCTTCGCCACCCACGACCCCAGGATCATCGCCGAGCTCAAGCGCTACACCGAG
GCCATGGGGATCCCCAGGTCGCGCTTTGAGTTCCAGTTCCTCTACGGGGTGCGCCCCGAGGAGCAGAGGCGGCTCGCCCA
GGAGGGGTACACGGTGCGGGCCTACGTGCCCTACGGCCGGGACTGGTACCCCTACCTCACCCGGAGGATCGCGGAGAGGC
CGGAGAACCTCCTCCTCGTCCTGAGGAGCCTGGTCTCCGGCTAG

Upstream 100 bases:

>100_bases
CCCTCCTCCGCAGGGACCCGGAGGAGGCGAGGCGGGCGGTGGAGGCCCACGTCTTCCGCTTCCGCGACCTGGTGGTGGGG
CGGCTTCGGGAGGAGGGAGG

Downstream 100 bases:

>100_bases
AGGAGGTGGAGGAGGATGACGGTGGAACCTTTCCGGAACGAGCCCATTGAGACCTTCCAGACGGAGGAGGCCCGGCGCGC
CATGCGCGAGGCCCTGAGGC

Product: proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNLDLAYRSFVLGVAGHPQVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAILDLLGEMVRTEEEARAFQRGL
LELVWALAGKPWPKYISLKLTQLGLDLSEDLALALLREVLREAEPRGVFVRLDMEDSPRVEATLRIYKALREEGFSQVGI
VLQSYLYRTEKDLLDLLPYRPNLRLVKGAYREPKEVAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPRIIAELKRYTE
AMGIPRSRFEFQFLYGVRPEEQRRLAQEGYTVRAYVPYGRDWYPYLTRRIAERPENLLLVLRSLVSG

Sequences:

>Translated_307_residues
MNLDLAYRSFVLGVAGHPQVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAILDLLGEMVRTEEEARAFQRGL
LELVWALAGKPWPKYISLKLTQLGLDLSEDLALALLREVLREAEPRGVFVRLDMEDSPRVEATLRIYKALREEGFSQVGI
VLQSYLYRTEKDLLDLLPYRPNLRLVKGAYREPKEVAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPRIIAELKRYTE
AMGIPRSRFEFQFLYGVRPEEQRRLAQEGYTVRAYVPYGRDWYPYLTRRIAERPENLLLVLRSLVSG
>Mature_307_residues
MNLDLAYRSFVLGVAGHPQVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAILDLLGEMVRTEEEARAFQRGL
LELVWALAGKPWPKYISLKLTQLGLDLSEDLALALLREVLREAEPRGVFVRLDMEDSPRVEATLRIYKALREEGFSQVGI
VLQSYLYRTEKDLLDLLPYRPNLRLVKGAYREPKEVAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPRIIAELKRYTE
AMGIPRSRFEFQFLYGVRPEEQRRLAQEGYTVRAYVPYGRDWYPYLTRRIAERPENLLLVLRSLVSG

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=341, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 35437; Mature: 35437

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDLAYRSFVLGVAGHPQVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAIL
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DLLGEMVRTEEEARAFQRGLLELVWALAGKPWPKYISLKLTQLGLDLSEDLALALLREVL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHHH
REAEPRGVFVRLDMEDSPRVEATLRIYKALREEGFSQVGIVLQSYLYRTEKDLLDLLPYR
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PNLRLVKGAYREPKEVAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPRIIAELKRYTE
CCCHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
AMGIPRSRFEFQFLYGVRPEEQRRLAQEGYTVRAYVPYGRDWYPYLTRRIAERPENLLLV
HHCCCCHHCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHH
LRSLVSG
HHHHHCC
>Mature Secondary Structure
MNLDLAYRSFVLGVAGHPQVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAIL
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DLLGEMVRTEEEARAFQRGLLELVWALAGKPWPKYISLKLTQLGLDLSEDLALALLREVL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHHH
REAEPRGVFVRLDMEDSPRVEATLRIYKALREEGFSQVGIVLQSYLYRTEKDLLDLLPYR
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PNLRLVKGAYREPKEVAFPDKRLIDAEYLHLGKLALKEGLYVAFATHDPRIIAELKRYTE
CCCHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
AMGIPRSRFEFQFLYGVRPEEQRRLAQEGYTVRAYVPYGRDWYPYLTRRIAERPENLLLV
HHCCCCHHCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHH
LRSLVSG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA