| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981514
Identifier: 55981514
GI number: 55981514
Start: 1471918
End: 1472457
Strand: Reverse
Name: 55981514
Synonym: TTHA1545
Alternate gene names: NA
Gene position: 1472457-1471918 (Counterclockwise)
Preceding gene: 55981516
Following gene: 55981513
Centisome position: 79.6
GC content: 73.15
Gene sequence:
>540_bases GTGGCCTTCGCCGAGGGGGCCTTGGACGCGCTAAAGGTGGCCTTCCAGGAGGGGGCGAGAAGCCTCGTCCTCCTCTCCCC GGTCCTCTTCCGGGACGCGCTGCTTTCGGCGCGGCTTGGCGCCTTGCGCTTCGGCCTGGAGCGGGGCGGGGTGGAGGGGT TTGCCCGGGTGGGCCGGGCCCTCTTCTTCGGGGCCTTAAGCGCGGGGAGCGAGGAGGTCTACGAGGCCTGGAAGGAGGGC CTGAGCGAGGCGGGGCTTTGGCGGTGGCTTGGCCGCCTCGAGGCCCTCGCCGACGAAAGGCGCTGGCTTAGGGGCACCGC GGCCCGGGTCCTCGTGGTCCAGGGGGCCCTGGACGCCTTCACCCCGCCCCTTCACGGGGCCAAGGTGGCCGACTTCGCCA AGGGGGAGGCCCTCCGCTTCGTGGTGGACGAGGCCGGGCACCTCGTGCCCTGGGAGGCCCAGGAGGAGGTCCGGGACCTG GTGGCGGACTTCCTCCTGGGGGAGGGGTTCAGGCCCCTGCCCGGGGGGCTCGCCTTATGA
Upstream 100 bases:
>100_bases AGGGGCCGTGGGCGAGATCCGGCTCTTCCCCGGCCTCCTCGCCCCCCCGGCGGGGCTGGACTTCCTCTTGGACCTCCCCT CGGAGGAAGGGCTCCACCTC
Downstream 100 bases:
>100_bases GGCGTGCGGGCTACCTCCACCTCTACGGCCTGAACCTGGTCTTTGACCGGGTGGGGAAGGGGCCTCCCGTCCTCCTGGTG GCCGAGGAAGCCTCCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAFAEGALDALKVAFQEGARSLVLLSPVLFRDALLSARLGALRFGLERGGVEGFARVGRALFFGALSAGSEEVYEAWKEG LSEAGLWRWLGRLEALADERRWLRGTAARVLVVQGALDAFTPPLHGAKVADFAKGEALRFVVDEAGHLVPWEAQEEVRDL VADFLLGEGFRPLPGGLAL
Sequences:
>Translated_179_residues MAFAEGALDALKVAFQEGARSLVLLSPVLFRDALLSARLGALRFGLERGGVEGFARVGRALFFGALSAGSEEVYEAWKEG LSEAGLWRWLGRLEALADERRWLRGTAARVLVVQGALDAFTPPLHGAKVADFAKGEALRFVVDEAGHLVPWEAQEEVRDL VADFLLGEGFRPLPGGLAL >Mature_178_residues AFAEGALDALKVAFQEGARSLVLLSPVLFRDALLSARLGALRFGLERGGVEGFARVGRALFFGALSAGSEEVYEAWKEGL SEAGLWRWLGRLEALADERRWLRGTAARVLVVQGALDAFTPPLHGAKVADFAKGEALRFVVDEAGHLVPWEAQEEVRDLV ADFLLGEGFRPLPGGLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19301; Mature: 19170
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAEGALDALKVAFQEGARSLVLLSPVLFRDALLSARLGALRFGLERGGVEGFARVGRA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFFGALSAGSEEVYEAWKEGLSEAGLWRWLGRLEALADERRWLRGTAARVLVVQGALDAF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPLHGAKVADFAKGEALRFVVDEAGHLVPWEAQEEVRDLVADFLLGEGFRPLPGGLAL CCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AFAEGALDALKVAFQEGARSLVLLSPVLFRDALLSARLGALRFGLERGGVEGFARVGRA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LFFGALSAGSEEVYEAWKEGLSEAGLWRWLGRLEALADERRWLRGTAARVLVVQGALDAF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPLHGAKVADFAKGEALRFVVDEAGHLVPWEAQEEVRDLVADFLLGEGFRPLPGGLAL CCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA