Click here to switch to the map view.

The map label for this gene is 55981509

Identifier: 55981509

GI number: 55981509

Start: 1466591

End: 1467166

Strand: Reverse

Name: 55981509

Synonym: TTHA1540

Alternate gene names: NA

Gene position: 1467166-1466591 (Counterclockwise)

Preceding gene: 55981512

Following gene: 55981506

Centisome position: 79.32

GC content: 67.19

Gene sequence:

>576_bases
GTGCGGCCCGCCCAGACCGGGGGCCGCCCCCGGGAAGGGGGGCCGCACATGAACGCGGCCCGTTCCTTCGCGGTGGACCT
CGCCCGGGGGAAGCGGGCGGAGACTGACCGCGCCGTTCTCGCGCTTCTACATGAGCTTTACCCGGACGGGAAGGTGCGCC
CCGCCCCGCCGGAGCTTGACGCTCAAGGGATTGACCTTGTGGTTCACCGCGCCCCGTTCTCAGTCGGGGTGCAGGTAAAA
GCGTACGGGGGCACCCTCGCACCCATCCGCACAGCGTGCGTCTTTCTAGAAGACTTTTCGGACATTGACCGCGCCATACC
GGGGTGGCTTTGGACCACACGGGCAGAAGTCTTGGTCGTCCGCTACGCCGATGCGCCCGTGGCCTTCCATGTTCCCGCCT
TACGCGCCATCGCAGAACGGAAGCGGGACGCATGGGCCCCATACCGCCACACCAATCAGTCAAGGTGGGGCCGCGCCCGC
TGGCGGTCGGCATATTGGCGTGCCCCCTTGCGCGAGGTTGTCGGGGCGCTTCTGGACCCCACGGGCGAGATTATTGCCGC
TTTATCAAGCCGATGA

Upstream 100 bases:

>100_bases
TCAACGCAGAAGCGGCCGCAAACCCCAGCCCCCGTATCCGTGGACCGGCCATTGAGCGCCTCGCGGCTTACGCGGCCGCA
GTAGGCGCGCCCCTTGCCAT

Downstream 100 bases:

>100_bases
CGGGTGAAGCTGTCCGGTGGATTTCCCTGAGGTCTTTTTCCGCAAGCCGCACATAGTGGGCGGTCATCACCGGGGACTTG
TGCCCGAGCATCGCTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRPAQTGGRPREGGPHMNAARSFAVDLARGKRAETDRAVLALLHELYPDGKVRPAPPELDAQGIDLVVHRAPFSVGVQVK
AYGGTLAPIRTACVFLEDFSDIDRAIPGWLWTTRAEVLVVRYADAPVAFHVPALRAIAERKRDAWAPYRHTNQSRWGRAR
WRSAYWRAPLREVVGALLDPTGEIIAALSSR

Sequences:

>Translated_191_residues
MRPAQTGGRPREGGPHMNAARSFAVDLARGKRAETDRAVLALLHELYPDGKVRPAPPELDAQGIDLVVHRAPFSVGVQVK
AYGGTLAPIRTACVFLEDFSDIDRAIPGWLWTTRAEVLVVRYADAPVAFHVPALRAIAERKRDAWAPYRHTNQSRWGRAR
WRSAYWRAPLREVVGALLDPTGEIIAALSSR
>Mature_191_residues
MRPAQTGGRPREGGPHMNAARSFAVDLARGKRAETDRAVLALLHELYPDGKVRPAPPELDAQGIDLVVHRAPFSVGVQVK
AYGGTLAPIRTACVFLEDFSDIDRAIPGWLWTTRAEVLVVRYADAPVAFHVPALRAIAERKRDAWAPYRHTNQSRWGRAR
WRSAYWRAPLREVVGALLDPTGEIIAALSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21163; Mature: 21163

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAQTGGRPREGGPHMNAARSFAVDLARGKRAETDRAVLALLHELYPDGKVRPAPPELD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
AQGIDLVVHRAPFSVGVQVKAYGGTLAPIRTACVFLEDFSDIDRAIPGWLWTTRAEVLVV
CCCCEEEEEECCCEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEE
RYADAPVAFHVPALRAIAERKRDAWAPYRHTNQSRWGRARWRSAYWRAPLREVVGALLDP
EECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC
TGEIIAALSSR
HHHHHHHHCCC
>Mature Secondary Structure
MRPAQTGGRPREGGPHMNAARSFAVDLARGKRAETDRAVLALLHELYPDGKVRPAPPELD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
AQGIDLVVHRAPFSVGVQVKAYGGTLAPIRTACVFLEDFSDIDRAIPGWLWTTRAEVLVV
CCCCEEEEEECCCEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEE
RYADAPVAFHVPALRAIAERKRDAWAPYRHTNQSRWGRARWRSAYWRAPLREVVGALLDP
EECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC
TGEIIAALSSR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA