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The map label for this gene is 55981490

Identifier: 55981490

GI number: 55981490

Start: 1446390

End: 1447310

Strand: Reverse

Name: 55981490

Synonym: TTHA1521

Alternate gene names: NA

Gene position: 1447310-1446390 (Counterclockwise)

Preceding gene: 55981491

Following gene: 55981483

Centisome position: 78.24

GC content: 74.81

Gene sequence:

>921_bases
GTGGACGCCCGGAAGGGCCGGGTCCGCATCCCCAGGGCCCGGGTGGGGGAGGAGGCCTTGGGGCTTCGCCTCGCCCACCA
CCTCGTCCTCTTCCGCGCCCGGCTTCTTCTTTCCCGGGAGGACCCCTTGGGGGCCCTGGAGCGGGCCGCCTTGGCCCTTC
CCTGGCCCGAGCTTGAGGAGGCGGGAAGCTTCCGCGTGGAGGCCCGGAGGGAGGGGGAACACCCCTTCACGAGCCCCGAG
GTGGAGAGGCGGGTAGGGGAGGCCCTCCACCGGGCCTACGGCGTGCCCGTGGACCTGAAGCGCCCGGCCGTGCGGGTCCG
GGTGGACGTCCGCGGGGAGGAGGCCTTCCTCGGGGTCCAGCTCACGGAAAGGCCCCTCTCCCGCCGCTTCCCCAAGGCGG
CCCTCCGGGGAAGCCTCACCCCCGTCCTCGCCCAGGCCCTCCTCCGCCTCGCGGACGCCCGCCCCGGGATGCGCGTCCTG
GACCCCTTCACGGGCTCGGGGACCATCGCCCTCGAGGCGGCGAGCACCCTGGGGCCCACGAGCCCCGTCTACGCCGGGGA
CCTGGACGAGAAGAGGCTCGGGCTCGCTCGGGAGGCGGCCCTGGCCTCGGGGCTTTCCTGGATCCGCTTCCTTCGGGCCG
ACGCCCGCCACCTCCCCCGCTTCTTCCCCGAGGTGGACCGGATCCTCGCCAACCCGCCCCACGGCCTCCGCCTGGGCCGG
AAGGAGGGGCTTTTCCGCCTCTACCGGGACTTCCTCCGCGGGGCCTTGGCCCTCCTCCTTCCTGGGGGAAGGGTCGCCCT
CCTCACCCTGCGCCCCGCCCTCCTCAAGCGGGCCCTGCCCCCGGGCTTCGCCCTCCGCCACGCCCGGGTGGTGGAGCAGG
GGGGCGTCTACCCCCGGGTCTTCGTCCTAGAGAAGCTCTAG

Upstream 100 bases:

>100_bases
GAGGCGGAGGCCCTTGTGGCTTGAGGCCACCACCCACCCGGGTCTGGAGGACCTCCTCCTGGAGGAGCTTTCCGCCCTCT
ACCCTGGCGAAGGGGCGGAG

Downstream 100 bases:

>100_bases
GGCGAGCTTTTCCCCCTCCTCGGGCACCCCCGCCGGGTAGCGCCCGTTGAAGCAGGCGAGGCAGACGGGCCGCCCGATGG
CCCGCTTGACCCCCTCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAALALPWPELEEAGSFRVEARREGEHPFTSPE
VERRVGEALHRAYGVPVDLKRPAVRVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVL
DPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGR
KEGLFRLYRDFLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRVFVLEKL

Sequences:

>Translated_306_residues
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAALALPWPELEEAGSFRVEARREGEHPFTSPE
VERRVGEALHRAYGVPVDLKRPAVRVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVL
DPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGR
KEGLFRLYRDFLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRVFVLEKL
>Mature_306_residues
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAALALPWPELEEAGSFRVEARREGEHPFTSPE
VERRVGEALHRAYGVPVDLKRPAVRVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVL
DPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGR
KEGLFRLYRDFLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRVFVLEKL

Specific function: Unknown

COG id: COG0116

COG function: function code L; Predicted N6-adenine-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

Organism=Homo sapiens, GI166197708, Length=259, Percent_Identity=30.1158301158301, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI166197706, Length=259, Percent_Identity=30.1158301158301, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI254553431, Length=209, Percent_Identity=30.1435406698565, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32566195, Length=233, Percent_Identity=25.7510729613734, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 33892; Mature: 33892

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: PS51165 THUMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAALALPWPELEE
CCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
AGSFRVEARREGEHPFTSPEVERRVGEALHRAYGVPVDLKRPAVRVRVDVRGEEAFLGVQ
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEE
LTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPT
EHHCHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEHHHCCCC
SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KEGLFRLYRDFLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHCCCCCEE
FVLEKL
EEEECC
>Mature Secondary Structure
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAALALPWPELEE
CCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
AGSFRVEARREGEHPFTSPEVERRVGEALHRAYGVPVDLKRPAVRVRVDVRGEEAFLGVQ
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEE
LTERPLSRRFPKAALRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPT
EHHCHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEHHHCCCC
SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
KEGLFRLYRDFLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRV
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHCCCCCEE
FVLEKL
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]