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The map label for this gene is pcaC [H]

Identifier: 55981477

GI number: 55981477

Start: 1435859

End: 1436224

Strand: Reverse

Name: pcaC [H]

Synonym: TTHA1508

Alternate gene names: 55981477

Gene position: 1436224-1435859 (Counterclockwise)

Preceding gene: 55981478

Following gene: 55981476

Centisome position: 77.64

GC content: 67.76

Gene sequence:

>366_bases
ATGAGCGTCCGGGCCGCCATCTGGGGGGAGAAGGCCGAGGCCATTGAGGAGAGCCTCAAGGCGGTGGACGAGGACCTCTT
CCGCTACATCCGGGACTTCGCCTACGAGGAGGTCCTGGCGAGGCCGGGCCTGGACCTGAAGACCCGGGAGCTTCTCGCCA
TCACCGCCCTCATCGCTCTGGGGAGCCCCAAGGAGCTCGCCACCCACCTGGAGGGGGCCTTGAGGGTGGGGGCCACGGAA
CGGGAGGTGCGGGAGACCATCCTGCAGTCCGCCCTCTTCCTCGGCTTTCCCCGGGCCCTGGCCGCCATGAAGCTTTTCCA
GAAGGTGCTCAAGGGCCGTGGTGCTCCTCACGAGGGGGAAGGATAG

Upstream 100 bases:

>100_bases
TGGGGGCGGAGGCCGTGGGGATGCGGGCCCTCCTCTTTGACCCCCTTGGGGAGAACCCCAAGGCCCTTCCCCGGCTGGAA
AGGGTGCTAGACTACCTCCC

Downstream 100 bases:

>100_bases
GGCGCTCCTTGCGAGGCTCGCCGCCCTCGGGATAGAGGCGGCGGAGGTGGCCCTTTTGGAGCAGGTGGACCTTCCCGCCC
GCGCCCTCCTCTCCGAAAAG

Product: gamma-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSVRAAIWGEKAEAIEESLKAVDEDLFRYIRDFAYEEVLARPGLDLKTRELLAITALIALGSPKELATHLEGALRVGATE
REVRETILQSALFLGFPRALAAMKLFQKVLKGRGAPHEGEG

Sequences:

>Translated_121_residues
MSVRAAIWGEKAEAIEESLKAVDEDLFRYIRDFAYEEVLARPGLDLKTRELLAITALIALGSPKELATHLEGALRVGATE
REVRETILQSALFLGFPRALAAMKLFQKVLKGRGAPHEGEG
>Mature_120_residues
SVRAAIWGEKAEAIEESLKAVDEDLFRYIRDFAYEEVLARPGLDLKTRELLAITALIALGSPKELATHLEGALRVGATER
EVRETILQSALFLGFPRALAAMKLFQKVLKGRGAPHEGEG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13319; Mature: 13187

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRAAIWGEKAEAIEESLKAVDEDLFRYIRDFAYEEVLARPGLDLKTRELLAITALIAL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GSPKELATHLEGALRVGATEREVRETILQSALFLGFPRALAAMKLFQKVLKGRGAPHEGE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
G
C
>Mature Secondary Structure 
SVRAAIWGEKAEAIEESLKAVDEDLFRYIRDFAYEEVLARPGLDLKTRELLAITALIAL
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GSPKELATHLEGALRVGATEREVRETILQSALFLGFPRALAAMKLFQKVLKGRGAPHEGE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]