| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981451
Identifier: 55981451
GI number: 55981451
Start: 1409641
End: 1410075
Strand: Reverse
Name: 55981451
Synonym: TTHA1482
Alternate gene names: NA
Gene position: 1410075-1409641 (Counterclockwise)
Preceding gene: 55981452
Following gene: 55981450
Centisome position: 76.23
GC content: 64.6
Gene sequence:
>435_bases GTGAGCATGGACAAGGAAACCCTCATCCAAGGCCTCAACCAGGATCTGGCCCACGAGTACCAGGCCATCATCCAGTACGT GACCTACGCCGCCACGGTCTCGGGCATTCATAGGGGCGAGCTCAAGGAGTTCTTCCTGGCGGAGATCCAGGACGAGCTCC GCCACGCCCAGTTCCTGGCGGACAAGATCGCCGCCCTGGGCGGGAAGCCCACCACGCAGCCCGCCCCCGTGCCCGAGGCC GCCACGCCCCGGGCCATGCTGGAGGCGGTGCTCCAGGCGGAGAAGGAGACCATCGCCCGCTACGTGGAAAGGATGAAGCA GGCCGAGGCCTATGGGGACTACGGCCTCGCCAACGACCTCCAGGAGATCATCTCCGAGGAAACCCGGCACAAGGAGGAGA CGGAGAAGCTTTTGAAGGGGACCTGGCAGGAATAA
Upstream 100 bases:
>100_bases GGGAACGTTCGCTGAGGCGGGCCCCGCCCCGGGCTTCCCTGGGGCGGGTTCTTTAAAAACCTTTTGGGTAAAATGGAAAG GCAAGCCCAGCTTGCGGGAG
Downstream 100 bases:
>100_bases GGGAGGCGGGCCATGCGCTTCCCGGAGCTTGCCCGGCGCTTCCTGGAGCGGAGGGGGTACCTATGGTGGTGACCTGCCCC AAATGCGGGGCCAAAAACCG
Product: bacterioferritin
Products: NA
Alternate protein names: Bacterioferritin; Bacterioferritin Family Protein; Ferritin And Dps; Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSMDKETLIQGLNQDLAHEYQAIIQYVTYAATVSGIHRGELKEFFLAEIQDELRHAQFLADKIAALGGKPTTQPAPVPEA ATPRAMLEAVLQAEKETIARYVERMKQAEAYGDYGLANDLQEIISEETRHKEETEKLLKGTWQE
Sequences:
>Translated_144_residues MSMDKETLIQGLNQDLAHEYQAIIQYVTYAATVSGIHRGELKEFFLAEIQDELRHAQFLADKIAALGGKPTTQPAPVPEA ATPRAMLEAVLQAEKETIARYVERMKQAEAYGDYGLANDLQEIISEETRHKEETEKLLKGTWQE >Mature_143_residues SMDKETLIQGLNQDLAHEYQAIIQYVTYAATVSGIHRGELKEFFLAEIQDELRHAQFLADKIAALGGKPTTQPAPVPEAA TPRAMLEAVLQAEKETIARYVERMKQAEAYGDYGLANDLQEIISEETRHKEETEKLLKGTWQE
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16234; Mature: 16102
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDKETLIQGLNQDLAHEYQAIIQYVTYAATVSGIHRGELKEFFLAEIQDELRHAQFLA CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIAALGGKPTTQPAPVPEAATPRAMLEAVLQAEKETIARYVERMKQAEAYGDYGLANDL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QEIISEETRHKEETEKLLKGTWQE HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMDKETLIQGLNQDLAHEYQAIIQYVTYAATVSGIHRGELKEFFLAEIQDELRHAQFLA CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIAALGGKPTTQPAPVPEAATPRAMLEAVLQAEKETIARYVERMKQAEAYGDYGLANDL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QEIISEETRHKEETEKLLKGTWQE HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA