| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981429
Identifier: 55981429
GI number: 55981429
Start: 1387104
End: 1388060
Strand: Direct
Name: 55981429
Synonym: TTHA1460
Alternate gene names: NA
Gene position: 1387104-1388060 (Clockwise)
Preceding gene: 55981428
Following gene: 55981432
Centisome position: 74.99
GC content: 70.01
Gene sequence:
>957_bases ATGCGGCGTGAAGGCTCGCCTTGGACCGGGCTATGGGCCGTCTTCTTCAAGGAGATGGCCGACCACCTCACCGGCCTCAG GATGCGGATCCTGGAGGTCCTCATCCTCCTCTCCGCCCTGGGGGCCCTCTACACGGGAAGCCAGGCCCTGCGCCAGACGG TGGGGGAGGACCCCTTCCTCTACCTCAAGCTCCTCACCACGGCCCAGGACCCCCTGCCCTCCTTCGTGGGCTTCCTCTCC TTCTTCATCCCCCTGGCCGCCATCGCCTTGGCCTTTGACGCGGTGAACGGGGAGTACGCCCGGGGGACGCTCTCCCGGGT CCTCTCCCAGCCCATCTACCGGGACGCCCTCCTCTTCGGCAAGTTCCTGGCGGGCCTCGGCACCCTGGCCCTCCTCCTCT TCGCCCTCTTCCTCATGGTGGTGGGCCTGGGCCTCCTCAGGCTGGGGGTGCCGCCGGGAAGCGAGGAGGTGGGGCGGGCC TTCTTCTTCCTCCTCGCCACCTTGGGCTACGCCGGGGTCTGGCTCGCCCTGGGCCTCCTCTTCTCCGTCCTCTTCCGCCA GCCCGCCACCGCCGCCCTGGCCGCCTTAGGGGTCTGGCTCTTCTTCGCCGTCTTCTACCCCATCCTCACCGACCTCGCGG CCACGGCCCTCCTCCTCCGGGCCGACCCCTTTGACCCGGAGAGCCAGCTCAGGCAGGCCCAGCTCGCCCTCTGGATCTCC CGCCTCTCCCCCAACACCCTCTACGCCGAGGCCCTCACCGCCCTCCTCAACCCGGCGGTCCGCTCCTTGGGCCCCATCCT CATCACCCAGCTGGAGGGCGCCGTCCTGGGCACGCCCCTTCCCCTCTCCCAGAGCGTCCTCCTGGTCTGGCCCCAGATCA CGGGGCTCCTCGCCCTCACCCTCCTCCTCTTCACCGGGGCCTACGTGGCCTTCCAGCGGCAGGAAGTGCGGGCGTGA
Upstream 100 bases:
>100_bases CTCGCCCGGCTCGTGGTGGAACGGGGCCCCCTCTACGCCCTGAGCCTGCGCCAGCCCAGCCTGGACGAGATCTACGCCCA CTACTTCAAGGAGGTGGCCC
Downstream 100 bases:
>100_bases GGCCGTGGCGTGTCCCCTACCCCTCCAGCCACTCCGTGGCGTAGCCGCTCGTCTTGGGGATGATGCAGAGGAACTCCACC GGCTCCTCCCCCTCGTTCAC
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease Protein; Abc Transporter Permease Protein; ABC Transporter; ABC-Type Transport Permease Protein; ABC-2 Type Transport System Permease Protein
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRREGSPWTGLWAVFFKEMADHLTGLRMRILEVLILLSALGALYTGSQALRQTVGEDPFLYLKLLTTAQDPLPSFVGFLS FFIPLAAIALAFDAVNGEYARGTLSRVLSQPIYRDALLFGKFLAGLGTLALLLFALFLMVVGLGLLRLGVPPGSEEVGRA FFFLLATLGYAGVWLALGLLFSVLFRQPATAALAALGVWLFFAVFYPILTDLAATALLLRADPFDPESQLRQAQLALWIS RLSPNTLYAEALTALLNPAVRSLGPILITQLEGAVLGTPLPLSQSVLLVWPQITGLLALTLLLFTGAYVAFQRQEVRA
Sequences:
>Translated_318_residues MRREGSPWTGLWAVFFKEMADHLTGLRMRILEVLILLSALGALYTGSQALRQTVGEDPFLYLKLLTTAQDPLPSFVGFLS FFIPLAAIALAFDAVNGEYARGTLSRVLSQPIYRDALLFGKFLAGLGTLALLLFALFLMVVGLGLLRLGVPPGSEEVGRA FFFLLATLGYAGVWLALGLLFSVLFRQPATAALAALGVWLFFAVFYPILTDLAATALLLRADPFDPESQLRQAQLALWIS RLSPNTLYAEALTALLNPAVRSLGPILITQLEGAVLGTPLPLSQSVLLVWPQITGLLALTLLLFTGAYVAFQRQEVRA >Mature_318_residues MRREGSPWTGLWAVFFKEMADHLTGLRMRILEVLILLSALGALYTGSQALRQTVGEDPFLYLKLLTTAQDPLPSFVGFLS FFIPLAAIALAFDAVNGEYARGTLSRVLSQPIYRDALLFGKFLAGLGTLALLLFALFLMVVGLGLLRLGVPPGSEEVGRA FFFLLATLGYAGVWLALGLLFSVLFRQPATAALAALGVWLFFAVFYPILTDLAATALLLRADPFDPESQLRQAQLALWIS RLSPNTLYAEALTALLNPAVRSLGPILITQLEGAVLGTPLPLSQSVLLVWPQITGLLALTLLLFTGAYVAFQRQEVRA
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34511; Mature: 34511
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRREGSPWTGLWAVFFKEMADHLTGLRMRILEVLILLSALGALYTGSQALRQTVGEDPFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH YLKLLTTAQDPLPSFVGFLSFFIPLAAIALAFDAVNGEYARGTLSRVLSQPIYRDALLFG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHH KFLAGLGTLALLLFALFLMVVGLGLLRLGVPPGSEEVGRAFFFLLATLGYAGVWLALGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVLFRQPATAALAALGVWLFFAVFYPILTDLAATALLLRADPFDPESQLRQAQLALWIS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLSPNTLYAEALTALLNPAVRSLGPILITQLEGAVLGTPLPLSQSVLLVWPQITGLLALT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLLFTGAYVAFQRQEVRA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRREGSPWTGLWAVFFKEMADHLTGLRMRILEVLILLSALGALYTGSQALRQTVGEDPFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH YLKLLTTAQDPLPSFVGFLSFFIPLAAIALAFDAVNGEYARGTLSRVLSQPIYRDALLFG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHH KFLAGLGTLALLLFALFLMVVGLGLLRLGVPPGSEEVGRAFFFLLATLGYAGVWLALGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVLFRQPATAALAALGVWLFFAVFYPILTDLAATALLLRADPFDPESQLRQAQLALWIS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RLSPNTLYAEALTALLNPAVRSLGPILITQLEGAVLGTPLPLSQSVLLVWPQITGLLALT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLLFTGAYVAFQRQEVRA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA