| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is comB [H]
Identifier: 55981407
GI number: 55981407
Start: 1364890
End: 1365603
Strand: Direct
Name: comB [H]
Synonym: TTHA1438
Alternate gene names: 55981407
Gene position: 1364890-1365603 (Clockwise)
Preceding gene: 55981406
Following gene: 55981409
Centisome position: 73.79
GC content: 73.67
Gene sequence:
>714_bases GTGCGCCTGCGCGTGGACGTGATCCCAGGGGAACACCTCGCCTACCCGGACGTGGTGCTGGTGGTGGACGTGATCCGGGC CACCACCACGGCGGCGGCCTTCCTGGAGGCGGGGGCCGAGGCCCTGTACTGGACGCCAAGCCTGGAGAGCGCCCTCGCCT TCAAGGACGAGGACGTGGTCCTGGCCGGGGAAACGGGGGGGCTGAAGCCGCCCCGGTTTGACCTGGGCAACAGCCCCCGG GAAGCCCTCTCGGCCCAGGTGGCGGGACGGGTGGTGGTCATGAGCACCACCAACGGCACCAAGGCGGCCCACGCCGCCGC CCGCACGGCCAAGCACGTCCTCCTGGCCTCCCTCTACAACGCCCACGCGGCGGCCCGCCTGGCGAGGGAGCTTGCCACGG AGGAGGTGGCCATCCTCTGCGCCGGAAAGGAAGGGCGGGCGGGCCTGGACGACCTCTACACCGCCGGGGTCCTGGCCGAG TACCTGGGGTTCCTGGGGGAGGTGGAGCCGGAGGACGGCGCCCGGGTCGCCCTCGCGGTGAAGCGGGCCTACCCCGACCC CCTGGAGGCCCTCTCCCTCTCCGCCGCCGCCCTGGCCCTCAAGCAGGTGGGCCTCGAGGCCGACGTCCCCTTCTGCGCCC AGGTGGCCAAAAGCGCCGCCGTCCCCGTCCTCCGGGGCCGGGTGGGCGAGGCCCTCATCTTCAAGCGGGCCTGA
Upstream 100 bases:
>100_bases GGCCGAGGAGGGGGTGGTCAGGCTCGGCCCCGGGACGGTGGAGGTGCGGGAAGCGGCGCTTCTTGAGGAGATCGCCTTCG GGCTTGCCTAGGAGGAAGCG
Downstream 100 bases:
>100_bases GCCTCCAGGCTCCACAAAAGCTGCCCACGGGGGGAAGCCCTTTTGGTGGGCTTAGCGGGCGGCGAGGCGGGCGTGGAAGC CCAGGCCGAGGAGGATGGGG
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRLRVDVIPGEHLAYPDVVLVVDVIRATTTAAAFLEAGAEALYWTPSLESALAFKDEDVVLAGETGGLKPPRFDLGNSPR EALSAQVAGRVVVMSTTNGTKAAHAAARTAKHVLLASLYNAHAAARLARELATEEVAILCAGKEGRAGLDDLYTAGVLAE YLGFLGEVEPEDGARVALAVKRAYPDPLEALSLSAAALALKQVGLEADVPFCAQVAKSAAVPVLRGRVGEALIFKRA
Sequences:
>Translated_237_residues MRLRVDVIPGEHLAYPDVVLVVDVIRATTTAAAFLEAGAEALYWTPSLESALAFKDEDVVLAGETGGLKPPRFDLGNSPR EALSAQVAGRVVVMSTTNGTKAAHAAARTAKHVLLASLYNAHAAARLARELATEEVAILCAGKEGRAGLDDLYTAGVLAE YLGFLGEVEPEDGARVALAVKRAYPDPLEALSLSAAALALKQVGLEADVPFCAQVAKSAAVPVLRGRVGEALIFKRA >Mature_237_residues MRLRVDVIPGEHLAYPDVVLVVDVIRATTTAAAFLEAGAEALYWTPSLESALAFKDEDVVLAGETGGLKPPRFDLGNSPR EALSAQVAGRVVVMSTTNGTKAAHAAARTAKHVLLASLYNAHAAARLARELATEEVAILCAGKEGRAGLDDLYTAGVLAE YLGFLGEVEPEDGARVALAVKRAYPDPLEALSLSAAALALKQVGLEADVPFCAQVAKSAAVPVLRGRVGEALIFKRA
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 24739; Mature: 24739
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRVDVIPGEHLAYPDVVLVVDVIRATTTAAAFLEAGAEALYWTPSLESALAFKDEDVV CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHEECCCCEE LAGETGGLKPPRFDLGNSPREALSAQVAGRVVVMSTTNGTKAAHAAARTAKHVLLASLYN EECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AHAAARLARELATEEVAILCAGKEGRAGLDDLYTAGVLAEYLGFLGEVEPEDGARVALAV HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE KRAYPDPLEALSLSAAALALKQVGLEADVPFCAQVAKSAAVPVLRGRVGEALIFKRA ECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEECC >Mature Secondary Structure MRLRVDVIPGEHLAYPDVVLVVDVIRATTTAAAFLEAGAEALYWTPSLESALAFKDEDVV CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHEECCCCEE LAGETGGLKPPRFDLGNSPREALSAQVAGRVVVMSTTNGTKAAHAAARTAKHVLLASLYN EECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AHAAARLARELATEEVAILCAGKEGRAGLDDLYTAGVLAEYLGFLGEVEPEDGARVALAV HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE KRAYPDPLEALSLSAAALALKQVGLEADVPFCAQVAKSAAVPVLRGRVGEALIFKRA ECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA