| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yqjP [H]
Identifier: 55981398
GI number: 55981398
Start: 1357610
End: 1358563
Strand: Direct
Name: yqjP [H]
Synonym: TTHA1429
Alternate gene names: 55981398
Gene position: 1357610-1358563 (Clockwise)
Preceding gene: 55981397
Following gene: 55981399
Centisome position: 73.39
GC content: 71.7
Gene sequence:
>954_bases GTGAAGGCCCTCCTGCCCGGCCTTTACCTCCTTCCCGTCCCCATCCCCTACCCCCTGAAGACGGTCAACCTCTACCTCCT CCAGGGGGCGGGGGAGGTGGCCCTCGTGGACACCGCCCTCGGCACCCGGGCCGCCCGGGGGGCCTTGGAGCTCCATCTGG CGGAGCTCGGCCTCTGCTTCCAGGACGTGAAGACTATCCTCCTCACCCACCACCACCCCGACCACTACGGCCTCTCCGGC TTCTTTGAGGGCCTGGGGGCCAGGGTCTTCCTCCACGAGGAGGAGTTCGCCCGGGGCCATCGCTTCTGGCGGGAGCCCGA GGCCTTCGCCGAGGCCTCTTGGCGGCTCTTCCTGGACCACGGCACCCCGGAAGGCGCCCTCCAGGGCATCCGGGAGACGG TGGAGAAGACGAGGGAGCGGGTCCACCCGCCGCAAAACCCCCTCCCCCTGAGGGACGGGGAGGCGCTGGAGGTGGCGGGG AAGCGGCTTAGGGTCCTCTGGACCCCGGGGCACGCGGACGGGCACGCGGCCTTCTACCTGGAGGAGGAGGGGGTGCTCCT CGCAGGGGACGCCCTCCTGGAAAAGGTCTCCCCCAACGTGGGCCTCTGGGCCTACACCCGGGAAAACCCCCTCAAGGACT TCCTCCGCTCCCTGGACCGCCTGGCGGACCTGGGGGCCAGGGTGGCCTACGCCGGCCACTTCGGGCCCATCGCGGACGTG CGGCAAAGGGCGGAGGAGCTCAAGGCCCACCACCAGGCCCGCCTCGAGGCCCTCCTCGCCCTCCTGGACGGACCCAAAAC CGCCTGGGAGCTCTCCCTCCACCTCTTTCCCCAGGAGCTGGACCCGGCGGGCCGGCGCTTCGCCTTCGCCGAGACCCTGG CCCACCTGGAGTACCTCCGGGAGGAGGGGGCGGTGGGGCGGGGGGGCCCGCCCTACCGGTACTTCCGGCGCTAA
Upstream 100 bases:
>100_bases GGGAGGTGGAGGCCCTGGGGGAGGGGGCCTACCGCTTCCCCTGGCACCTGGAGGAGCCCGACCCCTTCCTCGCCGCCCTC CTCCTCATGGGGGTGCTCCT
Downstream 100 bases:
>100_bases GGCCCCTAGCCCTGGCCGGGCTTGCCCCGGGGCGGAGTCCGGGGGTAAGCTTTGACCCGGTTCAAGGAGGTGCCATGAAG CCCTGGTACGCCCACTACGA
Product: metallo-beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKALLPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSG FFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAG KRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHFGPIADV RQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLREEGAVGRGGPPYRYFRR
Sequences:
>Translated_317_residues MKALLPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSG FFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAG KRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHFGPIADV RQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLREEGAVGRGGPPYRYFRR >Mature_317_residues MKALLPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSG FFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAG KRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHFGPIADV RQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLREEGAVGRGGPPYRYFRR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7705793, Length=251, Percent_Identity=25.8964143426295, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 35448; Mature: 35448
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCF CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH QDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDH HHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHCCCEEEEEEC GTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCEEEEE EEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHFGPIADV ECCCEEEECHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH RQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH EEGAVGRGGPPYRYFRR HCCCCCCCCCCHHHHCC >Mature Secondary Structure MKALLPGLYLLPVPIPYPLKTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCF CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH QDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGHRFWREPEAFAEASWRLFLDH HHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHCCCEEEEEEC GTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCEEEEE EEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGARVAYAGHFGPIADV ECCCEEEECHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH RQRAEELKAHHQARLEALLALLDGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH EEGAVGRGGPPYRYFRR HCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]