| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is pspE [C]
Identifier: 55981383
GI number: 55981383
Start: 1345471
End: 1345905
Strand: Reverse
Name: pspE [C]
Synonym: TTHA1414
Alternate gene names: 55981383
Gene position: 1345905-1345471 (Counterclockwise)
Preceding gene: 55981384
Following gene: 55981382
Centisome position: 72.76
GC content: 68.74
Gene sequence:
>435_bases ATGCGCCGGCGGGACCTCTTGGCCCTTCTCCCCTTCCTCGCCCTGGCCCGGGGGCAGGGCGGGGCGGGGGAGGACTGGAC CGAGGCCTTCGGCCGCTTCCTCAAGGCGGTGCCCCCGGCGGGCTACCTCGTCTACCCCACGGAGGCCTCCGACCTCCTCC TCTTTGAGCCCTTCATCCTGGACGTGCGCACGGAGGAGGAGCGCAAGAAGGGGTACATCCCGGGCTCGGTGCACATCTAC GCCGGGGAGGTCCCGGACCGCCTGGGGGAGCTTCCCCGGGACAAGGAGGCCTTGATCCTCGTTTACTGCAACTCGGGGAG CGTTTCCGCGGTGGTGGCGGCGTTTCTGCAGGCCAAAGGCTACAAGAACGCCAAGAACATCGCCCACGGCTTCAAGGGCT GGCTGGACGCCGGCCTTCCGGTGGAGGGAGCATGA
Upstream 100 bases:
>100_bases TCTACTCGGAGGTCCACATCGCCCTCACCACCTACATCCTGGCCGAGGCCACCAAGGCGGGGCACTCCTTCCTGGAGCTT CCCTTCTTCACGAGGTAGCC
Downstream 100 bases:
>100_bases AAAGGATCCTGGTGGCGGTTCTCGCGGCGCTGGGCCTGGCCTTGGCCCAGGCCCTGGTGGTGGAGGTGGAGGGTTCCTTG GAGGACGTGGAGGCGAGGGC
Product: sulfurtransferase
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Beta-Lactamase Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese Homology Domain Superfamily Protein; Sulfurtransferase; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese Family Protein; Hydrolase; Rhodanese-Like
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRRRDLLALLPFLALARGQGGAGEDWTEAFGRFLKAVPPAGYLVYPTEASDLLLFEPFILDVRTEEERKKGYIPGSVHIY AGEVPDRLGELPRDKEALILVYCNSGSVSAVVAAFLQAKGYKNAKNIAHGFKGWLDAGLPVEGA
Sequences:
>Translated_144_residues MRRRDLLALLPFLALARGQGGAGEDWTEAFGRFLKAVPPAGYLVYPTEASDLLLFEPFILDVRTEEERKKGYIPGSVHIY AGEVPDRLGELPRDKEALILVYCNSGSVSAVVAAFLQAKGYKNAKNIAHGFKGWLDAGLPVEGA >Mature_144_residues MRRRDLLALLPFLALARGQGGAGEDWTEAFGRFLKAVPPAGYLVYPTEASDLLLFEPFILDVRTEEERKKGYIPGSVHIY AGEVPDRLGELPRDKEALILVYCNSGSVSAVVAAFLQAKGYKNAKNIAHGFKGWLDAGLPVEGA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15676; Mature: 15676
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRDLLALLPFLALARGQGGAGEDWTEAFGRFLKAVPPAGYLVYPTEASDLLLFEPFIL CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEE DVRTEEERKKGYIPGSVHIYAGEVPDRLGELPRDKEALILVYCNSGSVSAVVAAFLQAKG EECCCHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC YKNAKNIAHGFKGWLDAGLPVEGA CCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRRRDLLALLPFLALARGQGGAGEDWTEAFGRFLKAVPPAGYLVYPTEASDLLLFEPFIL CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEE DVRTEEERKKGYIPGSVHIYAGEVPDRLGELPRDKEALILVYCNSGSVSAVVAAFLQAKG EECCCHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC YKNAKNIAHGFKGWLDAGLPVEGA CCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA