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The map label for this gene is 55981349

Identifier: 55981349

GI number: 55981349

Start: 1316449

End: 1317072

Strand: Direct

Name: 55981349

Synonym: TTHA1380

Alternate gene names: NA

Gene position: 1316449-1317072 (Clockwise)

Preceding gene: 55981348

Following gene: 55981350

Centisome position: 71.17

GC content: 70.35

Gene sequence:

>624_bases
TTGATTAGGCTGAACCTTCTCCCCAAAAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCCTTGAGGCCCTTCATCGCCGAGCTCGGCCGCCTGCAGGAGGAGCGTAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGCGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAAGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGTGACGGGGGGTGAAAGCGGTGCTCGCTAG

Upstream 100 bases:

>100_bases
GTGGCGGTGGACCCCAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTAGCCCTGGGCTTGGC
GTTGAGGGGGGTGGAGCCCC

Downstream 100 bases:

>100_bases
GCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTACCTGCTCATCG
TGCCCACGAGGCAGGAGATC

Product: competence protein PilN

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilN; Fimbrial Assembly; Competence Protein PilN

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGVTGGESGAR

Sequences:

>Translated_207_residues
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGVTGGESGAR
>Mature_207_residues
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGVTGGESGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23064; Mature: 23064

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEV
CEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALRPFIAELGRLQEERKALEALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
SVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSREALVRFIRAFETSPRFGIEFQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEC
GASLDEGRGLYTFSARVGVTGGESGAR
CCCCCCCCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEV
CEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALRPFIAELGRLQEERKALEALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
SVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSREALVRFIRAFETSPRFGIEFQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEC
GASLDEGRGLYTFSARVGVTGGESGAR
CCCCCCCCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA