| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981340
Identifier: 55981340
GI number: 55981340
Start: 1307742
End: 1308770
Strand: Direct
Name: 55981340
Synonym: TTHA1371
Alternate gene names: NA
Gene position: 1307742-1308770 (Clockwise)
Preceding gene: 55981339
Following gene: 55981342
Centisome position: 70.7
GC content: 73.28
Gene sequence:
>1029_bases ATGCCCTCCTGCCTGCTCCTCTCCACCCTCTTGGGCTCGGCCCTTTTCGCGGGCCTGGGCGAGGTGGCGGTGGGGCGGCT TCTGGTGGAAGGAGGGCACCGGGCCCTGATCCTGGGCCCCGCGGGGGCCTACCTCCTGGAGGGGGAGGCCAACTCCGCCC TCTACGGCCTGGCCCGAAGGCCCGGGGGGTACCTGGCGGTGGGCCACCTAGGGGAGCGCCTCCTCCGGGTCACCTTGGAC GCCGAGGGCCGCCCCCTCGCGGCCCTGGTGGGCGGCCAAGGCATCCTCTGGGGGACCGACGGCCGCTTCGCCTGGGGGGG CCACCTGGGGCCCCAGGGCTGGCAGGCGTTGGTCCTAGAGGGGACGCGGGCCCACCGCCTCCCCCTGCCCGCGGAGGGGT ACGCCTACGGCGGGCTCTACCGCGCGGGGGTCCTCTTTCTGGTGGGCCGCGTGGCCAGCCCCGGGGGGTTTGACGCCTTC TTCCTCGGCCTCAAAGACGGCTACGCCCAGGGCTACCAAAGCGGCTTCCCGGGGAACGACTACCTCCGCTTCCTGGGCGA GCGGGGAGCGGTGGGGCGCCTGGAGGTGGAAGGGGACTCGGAGGGCCTAGTTCTGGACTGGCCCGGACTTCTTCGGGGAA AGGCCCGCCTCCTGCGCCGCCCCGGCTTTGACTACCTCAGGGCCTGGCAGGGGGCGTACCTCGTGGGGGAGGCGGAGGTG GCGGGCGTCCTCCAGGGCCTCTGGCTCGGGCCCAAAGGAGCCCGCCACGGGGGAGGCCCAGGGGCTTCCCTCCGGGCCCT AGACCCTCCCTGGGCGTACGGGTACTCCTACCGGGCCCTCTTCCAGGGGGAGGGGCTTTTCCTGGACCTCGAGGCCGAGG CGGGGGAGCCCATTCCCTACCGCACGGAACCCCTCACCCTCCCCAAAAGGCCCTGGACCCTCAAGGCCTCGCCCCTTCCC CTCTCCTGGTATCCGGCCTCCTTCCGGAAGATCCCCCCACCCGGCAAGAGGCCCTGCCCCAGGCCCTAG
Upstream 100 bases:
>100_bases GAGGAGGCCGCCCTTTACCTGGAACGCCTCCTCGCCCCCGACCCCAAGGCGCGCTTCCCCACGGCCCAGGAGGCCCTGAA GGCCTTCCCCTTTTAGCGCC
Downstream 100 bases:
>100_bases CGGGCGAAGGCCCCCTGGGCGAGAAAGGCGAGGATCCCCTCCGCCAGGCCCTGGGCTACCCGTTCCCGGTAGGCCGCCTC GGCGAGCCTCCGCCCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPSCLLLSTLLGSALFAGLGEVAVGRLLVEGGHRALILGPAGAYLLEGEANSALYGLARRPGGYLAVGHLGERLLRVTLD AEGRPLAALVGGQGILWGTDGRFAWGGHLGPQGWQALVLEGTRAHRLPLPAEGYAYGGLYRAGVLFLVGRVASPGGFDAF FLGLKDGYAQGYQSGFPGNDYLRFLGERGAVGRLEVEGDSEGLVLDWPGLLRGKARLLRRPGFDYLRAWQGAYLVGEAEV AGVLQGLWLGPKGARHGGGPGASLRALDPPWAYGYSYRALFQGEGLFLDLEAEAGEPIPYRTEPLTLPKRPWTLKASPLP LSWYPASFRKIPPPGKRPCPRP
Sequences:
>Translated_342_residues MPSCLLLSTLLGSALFAGLGEVAVGRLLVEGGHRALILGPAGAYLLEGEANSALYGLARRPGGYLAVGHLGERLLRVTLD AEGRPLAALVGGQGILWGTDGRFAWGGHLGPQGWQALVLEGTRAHRLPLPAEGYAYGGLYRAGVLFLVGRVASPGGFDAF FLGLKDGYAQGYQSGFPGNDYLRFLGERGAVGRLEVEGDSEGLVLDWPGLLRGKARLLRRPGFDYLRAWQGAYLVGEAEV AGVLQGLWLGPKGARHGGGPGASLRALDPPWAYGYSYRALFQGEGLFLDLEAEAGEPIPYRTEPLTLPKRPWTLKASPLP LSWYPASFRKIPPPGKRPCPRP >Mature_341_residues PSCLLLSTLLGSALFAGLGEVAVGRLLVEGGHRALILGPAGAYLLEGEANSALYGLARRPGGYLAVGHLGERLLRVTLDA EGRPLAALVGGQGILWGTDGRFAWGGHLGPQGWQALVLEGTRAHRLPLPAEGYAYGGLYRAGVLFLVGRVASPGGFDAFF LGLKDGYAQGYQSGFPGNDYLRFLGERGAVGRLEVEGDSEGLVLDWPGLLRGKARLLRRPGFDYLRAWQGAYLVGEAEVA GVLQGLWLGPKGARHGGGPGASLRALDPPWAYGYSYRALFQGEGLFLDLEAEAGEPIPYRTEPLTLPKRPWTLKASPLPL SWYPASFRKIPPPGKRPCPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36446; Mature: 36315
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSCLLLSTLLGSALFAGLGEVAVGRLLVEGGHRALILGPAGAYLLEGEANSALYGLARR CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEECCCCCEEEEHCCC PGGYLAVGHLGERLLRVTLDAEGRPLAALVGGQGILWGTDGRFAWGGHLGPQGWQALVLE CCCEEEHHHHCCEEEEEEECCCCCEEEEEECCCEEEEECCCCEEECCCCCCCCCEEEEEE GTRAHRLPLPAEGYAYGGLYRAGVLFLVGRVASPGGFDAFFLGLKDGYAQGYQSGFPGND CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCH YLRFLGERGAVGRLEVEGDSEGLVLDWPGLLRGKARLLRRPGFDYLRAWQGAYLVGEAEV HHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHH AGVLQGLWLGPKGARHGGGPGASLRALDPPWAYGYSYRALFQGEGLFLDLEAEAGEPIPY HHHHHHHEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCC RTEPLTLPKRPWTLKASPLPLSWYPASFRKIPPPGKRPCPRP CCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSCLLLSTLLGSALFAGLGEVAVGRLLVEGGHRALILGPAGAYLLEGEANSALYGLARR CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEECCCCCEEEEHCCC PGGYLAVGHLGERLLRVTLDAEGRPLAALVGGQGILWGTDGRFAWGGHLGPQGWQALVLE CCCEEEHHHHCCEEEEEEECCCCCEEEEEECCCEEEEECCCCEEECCCCCCCCCEEEEEE GTRAHRLPLPAEGYAYGGLYRAGVLFLVGRVASPGGFDAFFLGLKDGYAQGYQSGFPGND CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCH YLRFLGERGAVGRLEVEGDSEGLVLDWPGLLRGKARLLRRPGFDYLRAWQGAYLVGEAEV HHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHH AGVLQGLWLGPKGARHGGGPGASLRALDPPWAYGYSYRALFQGEGLFLDLEAEAGEPIPY HHHHHHHEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCC RTEPLTLPKRPWTLKASPLPLSWYPASFRKIPPPGKRPCPRP CCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA