| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981319
Identifier: 55981319
GI number: 55981319
Start: 1290216
End: 1291058
Strand: Reverse
Name: 55981319
Synonym: TTHA1350
Alternate gene names: NA
Gene position: 1291058-1290216 (Counterclockwise)
Preceding gene: 55981320
Following gene: 55981314
Centisome position: 69.8
GC content: 74.02
Gene sequence:
>843_bases ATGCGCGTCGGCTTGGTCCACGGCTTCCTCTCCCGCCGCTACCTGGACTTCTGGCGGGCCTACCTCGAGGCCCTGGGCGT GGAGGTGGTGGAGGCCGCGCCGCCTCCCTCCGACCTCCCCTTCTGCCTTCCCGTGCAGCGCCTCCTCGCCCAGGTGGAGG CCCTGAAGGAAGCGGGGGTGGACTACCTCCTCCTTCCCGACCTGCAGGGCGGGGTGGAGTCGGAGCGGGGCGGAGGGCAG TGCCCCTGGCTTTTGGACCTGGAGGCCGCCCTCCTCCGCTACTTCCCCGGCCTGCCCCCGGTGCTCAAGGTCCCGGCGGA GCTCTCCGAGCGGGTTTTGGGCCGGGCGGGAGAGGTGGGCCAGCTCCTCGTCCGCAACCCCATGCTCGTGGGCCGGGCCT TGGACCGTACCCGGAGGCTCCTCAAGCCCCCCCCGCCCCTCCCCACGCCCCAGGGGAGCGTGGGGGTCGTGGCCCAGCCC TACCTCCTGGAGGAGCCCGCCTTCCGCCGGGAGGTGGAGGCGGCCCTGAGGGCCCACGGCCTCGAGGCCTACTTCCCCGA CCTCCCCCCCGAGCGGCTTCGGGAGGAGGCGGACCGGCTTCTCCCCGTGGACCTGCCCACGGACCGGGAGCTCGTGGGGG CGATCCACTACCTGGGGCGGCTCGGCCGGGTCAAGGGCCTCGCCCTGGTGGTCTCCTACGCCTGCCCCCCCATCCCGGGC CTCATGCGCAAGGCGGCCCGGCGCCTGGGCAAGCCCTACCGCCTCCTCACCCTGGGGGAGGACTGGCAGGAGCCCCTCGC CGCCCTCAAGGCGGAGATGGAAAAGGGCAACCGGGGGGGCTAG
Upstream 100 bases:
>100_bases GGCCCACACCCCGGGGGAGTGGGTCCTGCCGAGTAGCCTCCTGGAGGGCCAGCGGGCCCTCCTCGCCCTCCTCCGCGGGC TTGGCGTAGGATAAGGCGGT
Downstream 100 bases:
>100_bases CGCCCCCCCCGGCGGAAGGGCCGCTTACTTCTTGACCTTATCCTTCAGGGCCTTGCCGGGCTTGAAGGCGGGATACTGGG TGGCGGGGATCTTGATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLAQVEALKEAGVDYLLLPDLQGGVESERGGGQ CPWLLDLEAALLRYFPGLPPVLKVPAELSERVLGRAGEVGQLLVRNPMLVGRALDRTRRLLKPPPPLPTPQGSVGVVAQP YLLEEPAFRREVEAALRAHGLEAYFPDLPPERLREEADRLLPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPG LMRKAARRLGKPYRLLTLGEDWQEPLAALKAEMEKGNRGG
Sequences:
>Translated_280_residues MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLAQVEALKEAGVDYLLLPDLQGGVESERGGGQ CPWLLDLEAALLRYFPGLPPVLKVPAELSERVLGRAGEVGQLLVRNPMLVGRALDRTRRLLKPPPPLPTPQGSVGVVAQP YLLEEPAFRREVEAALRAHGLEAYFPDLPPERLREEADRLLPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPG LMRKAARRLGKPYRLLTLGEDWQEPLAALKAEMEKGNRGG >Mature_280_residues MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLAQVEALKEAGVDYLLLPDLQGGVESERGGGQ CPWLLDLEAALLRYFPGLPPVLKVPAELSERVLGRAGEVGQLLVRNPMLVGRALDRTRRLLKPPPPLPTPQGSVGVVAQP YLLEEPAFRREVEAALRAHGLEAYFPDLPPERLREEADRLLPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPG LMRKAARRLGKPYRLLTLGEDWQEPLAALKAEMEKGNRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30868; Mature: 30868
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLAQVEALKEAGV CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DYLLLPDLQGGVESERGGGQCPWLLDLEAALLRYFPGLPPVLKVPAELSERVLGRAGEVG CEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCHH QLLVRNPMLVGRALDRTRRLLKPPPPLPTPQGSVGVVAQPYLLEEPAFRREVEAALRAHG HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHCC LEAYFPDLPPERLREEADRLLPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPG CHHHCCCCCHHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LMRKAARRLGKPYRLLTLGEDWQEPLAALKAEMEKGNRGG HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLAQVEALKEAGV CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DYLLLPDLQGGVESERGGGQCPWLLDLEAALLRYFPGLPPVLKVPAELSERVLGRAGEVG CEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCHH QLLVRNPMLVGRALDRTRRLLKPPPPLPTPQGSVGVVAQPYLLEEPAFRREVEAALRAHG HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHCC LEAYFPDLPPERLREEADRLLPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPG CHHHCCCCCHHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LMRKAARRLGKPYRLLTLGEDWQEPLAALKAEMEKGNRGG HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA