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The map label for this gene is 55981285

Identifier: 55981285

GI number: 55981285

Start: 1254862

End: 1255974

Strand: Direct

Name: 55981285

Synonym: TTHA1316

Alternate gene names: NA

Gene position: 1254862-1255974 (Clockwise)

Preceding gene: 55981283

Following gene: 55981286

Centisome position: 67.84

GC content: 71.16

Gene sequence:

>1113_bases
GTGTTCCAGCACGGGATCTTCCTCTTCCGCCTGGCGGGGATCCCCGTCCACCTGGACCTCTCCTTCCTCCTCGTCCTCCC
CTTGTGGGCCCTATACATCGGGCGGAACCTGCCCCACTACTTCGCCCTCCTCGGCCTCCCCCAGGACCCCCGCCTCCTCC
AGGGCCCCTACCCCTTCCTCCTCGGCCTCCTCGCCGCCACGGGCCTCTTCCTCTCCGTCCTCCTCCACGAGGTCGGCCAC
GCCCTGGCGGCGAGGCGGTACGGGGTGGCGACCCGGCGGATCACCCTCTGGCTCCTGGGCGGCGTGGCCCAGATGGAAAG
GATCCCCAGGGAGCCTATGAAGGAGCTCGTCATCGCCCTGGCGGGGCCTCTGGTGAGCCTCCTCCTCTTCCTCCTCTTCC
GGACCCTCCCCTGGGAGGCGGGGGCCTTGGGCTTCCTCGGCCGCTACCTCGCCCTGGTGAACCTGGGCCTCGCCCTCTTC
AACCTCCTCCCCGCCCTGCCCCTGGACGGCGGGAGGGTCTACCGGGCGCTCCTCGCCCTGAGGAAGCCTTACCTCCAGGC
CACGCGCCAGGCCGTGGCCCTGAGCCAGGCCCTGGCCTGGGCCCTCGGCCTCTTCGGCCTCCTCGTCCTGAACCCCCTCC
TCGTCCTCATCGCCTTCTTCGTCTACATGGCCTCGAGGGCCGACGCCGAGGCCACCCTCCTGGCCCAGGCCCTGGAGGGC
CTAAAGGTGAAGGACCTGATGACCCCAAACCCCATCGTCCTCCCCCCGGACCTGCCCGTGGGGGAGGCCCTGGCCCTGGC
CCTGCGCCACAAGGTCTCCGGCTTTCCCGTGGTGGCGGAGGGCCGCATCCTGGGGGTGGTGGGCCTCGAGGGCCTGGAGG
GGGCGAACCCCCTGGACCCCGTGGCCCGCCACCTCCTTCCCCCCCTCCTCCTCTCCCCCGAGGAGGACGCCCTTACCGCC
CTGGAGCGCATGGCGGAACGCGGGTACGCCCGGGCGCTGGTGGTGGAGGGGGACCGGCTTCTCGGCGTCCTCAGCAAGAC
CGACCTCCTCCGCGCCTTCCAGGTGCGGCTTCTGGGACTTTCCCACCTTGACAGGCCTAAGGGGCCCGAATAA

Upstream 100 bases:

>100_bases
CCCGGGGTCTTTGAGAAGGGCGAGCGCCAGCACCCCTCCATGCTAACCCTGACTGACCGGTCATTACACCCCCGCGCCCC
ACCCGCCCCTATACTGAGGC

Downstream 100 bases:

>100_bases
CCTGGGGGTGCAAAACTATGCGGAGGTGATGCGGATGAAGCGAGCCCTAGCCCTATTCGCCCTCTTGGCCTTAGGCGTGA
GCGTGGCGCAGAAGCCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Site-2-type intermembrane protease [H]

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MFQHGIFLFRLAGIPVHLDLSFLLVLPLWALYIGRNLPHYFALLGLPQDPRLLQGPYPFLLGLLAATGLFLSVLLHEVGH
ALAARRYGVATRRITLWLLGGVAQMERIPREPMKELVIALAGPLVSLLLFLLFRTLPWEAGALGFLGRYLALVNLGLALF
NLLPALPLDGGRVYRALLALRKPYLQATRQAVALSQALAWALGLFGLLVLNPLLVLIAFFVYMASRADAEATLLAQALEG
LKVKDLMTPNPIVLPPDLPVGEALALALRHKVSGFPVVAEGRILGVVGLEGLEGANPLDPVARHLLPPLLLSPEEDALTA
LERMAERGYARALVVEGDRLLGVLSKTDLLRAFQVRLLGLSHLDRPKGPE

Sequences:

>Translated_370_residues
MFQHGIFLFRLAGIPVHLDLSFLLVLPLWALYIGRNLPHYFALLGLPQDPRLLQGPYPFLLGLLAATGLFLSVLLHEVGH
ALAARRYGVATRRITLWLLGGVAQMERIPREPMKELVIALAGPLVSLLLFLLFRTLPWEAGALGFLGRYLALVNLGLALF
NLLPALPLDGGRVYRALLALRKPYLQATRQAVALSQALAWALGLFGLLVLNPLLVLIAFFVYMASRADAEATLLAQALEG
LKVKDLMTPNPIVLPPDLPVGEALALALRHKVSGFPVVAEGRILGVVGLEGLEGANPLDPVARHLLPPLLLSPEEDALTA
LERMAERGYARALVVEGDRLLGVLSKTDLLRAFQVRLLGLSHLDRPKGPE
>Mature_370_residues
MFQHGIFLFRLAGIPVHLDLSFLLVLPLWALYIGRNLPHYFALLGLPQDPRLLQGPYPFLLGLLAATGLFLSVLLHEVGH
ALAARRYGVATRRITLWLLGGVAQMERIPREPMKELVIALAGPLVSLLLFLLFRTLPWEAGALGFLGRYLALVNLGLALF
NLLPALPLDGGRVYRALLALRKPYLQATRQAVALSQALAWALGLFGLLVLNPLLVLIAFFVYMASRADAEATLLAQALEG
LKVKDLMTPNPIVLPPDLPVGEALALALRHKVSGFPVVAEGRILGVVGLEGLEGANPLDPVARHLLPPLLLSPEEDALTA
LERMAERGYARALVVEGDRLLGVLSKTDLLRAFQVRLLGLSHLDRPKGPE

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 40257; Mature: 40257

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQHGIFLFRLAGIPVHLDLSFLLVLPLWALYIGRNLPHYFALLGLPQDPRLLQGPYPFL
CCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHH
LGLLAATGLFLSVLLHEVGHALAARRYGVATRRITLWLLGGVAQMERIPREPMKELVIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGPLVSLLLFLLFRTLPWEAGALGFLGRYLALVNLGLALFNLLPALPLDGGRVYRALLAL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RKPYLQATRQAVALSQALAWALGLFGLLVLNPLLVLIAFFVYMASRADAEATLLAQALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
LKVKDLMTPNPIVLPPDLPVGEALALALRHKVSGFPVVAEGRILGVVGLEGLEGANPLDP
CEEHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCHHH
VARHLLPPLLLSPEEDALTALERMAERGYARALVVEGDRLLGVLSKTDLLRAFQVRLLGL
HHHHHCCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
SHLDRPKGPE
HHCCCCCCCC
>Mature Secondary Structure
MFQHGIFLFRLAGIPVHLDLSFLLVLPLWALYIGRNLPHYFALLGLPQDPRLLQGPYPFL
CCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHH
LGLLAATGLFLSVLLHEVGHALAARRYGVATRRITLWLLGGVAQMERIPREPMKELVIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGPLVSLLLFLLFRTLPWEAGALGFLGRYLALVNLGLALFNLLPALPLDGGRVYRALLAL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RKPYLQATRQAVALSQALAWALGLFGLLVLNPLLVLIAFFVYMASRADAEATLLAQALEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
LKVKDLMTPNPIVLPPDLPVGEALALALRHKVSGFPVVAEGRILGVVGLEGLEGANPLDP
CEEHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCHHH
VARHLLPPLLLSPEEDALTALERMAERGYARALVVEGDRLLGVLSKTDLLRAFQVRLLGL
HHHHHCCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
SHLDRPKGPE
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]