| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981266
Identifier: 55981266
GI number: 55981266
Start: 1237350
End: 1237694
Strand: Reverse
Name: 55981266
Synonym: TTHA1297
Alternate gene names: NA
Gene position: 1237694-1237350 (Counterclockwise)
Preceding gene: 55981267
Following gene: 55981264
Centisome position: 66.91
GC content: 60.29
Gene sequence:
>345_bases ATGGGGGAAACCTTTGCGGAGGTCAAGCGGGAACTCATAGCCCTCCTTCGCCCTGGCGTGCGGGTGCCGAACTGGTCCAA GGCTGCGGAGAAAAACCCCGGTCGCCTGAAGAGGCGGGAGTTTGTCGTGCTTGAGGTGGACAAGGCGAAGGGGTTGGCGC TTCAGAGCGGGGAGAAGCGGGTAGAGGTTCCTTGGGGGGCGTTGGAGAACGTCTGGCGGAAGTGGAGGGACTACCGGGAA TGCCGCCTGAAAAGAAAAGACCTTGCCGAGAAGAACTTTTTCACCACCTACTGCATCGCCCTTCTCCGTTTCCTGGAAGA GAACCTGGGGGGCCCTCGGGTTTAG
Upstream 100 bases:
>100_bases GGGGCAAGCCGGCATGGGGGCCCCGGCAAAGGGTTCTCAAGGGGCTCCCTGGGCCTAAGAGGGCTGTTGCGGCCTCTGCC GAAGCCCCCATAATGGTTGC
Downstream 100 bases:
>100_bases GCCCCCCAGGATCGTGTGGCGCCTAGCGGTTTAGCTCCTCCAGGGCCCGCTTGAGGATGGCGTCGTTCTCCAGGTCCAGA ACCGCCTGGCCCCGGTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGETFAEVKRELIALLRPGVRVPNWSKAAEKNPGRLKRREFVVLEVDKAKGLALQSGEKRVEVPWGALENVWRKWRDYRE CRLKRKDLAEKNFFTTYCIALLRFLEENLGGPRV
Sequences:
>Translated_114_residues MGETFAEVKRELIALLRPGVRVPNWSKAAEKNPGRLKRREFVVLEVDKAKGLALQSGEKRVEVPWGALENVWRKWRDYRE CRLKRKDLAEKNFFTTYCIALLRFLEENLGGPRV >Mature_113_residues GETFAEVKRELIALLRPGVRVPNWSKAAEKNPGRLKRREFVVLEVDKAKGLALQSGEKRVEVPWGALENVWRKWRDYREC RLKRKDLAEKNFFTTYCIALLRFLEENLGGPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13343; Mature: 13212
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGETFAEVKRELIALLRPGVRVPNWSKAAEKNPGRLKRREFVVLEVDKAKGLALQSGEKR CCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHEEEEEEECCCCCCEECCCCCE VEVPWGALENVWRKWRDYRECRLKRKDLAEKNFFTTYCIALLRFLEENLGGPRV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GETFAEVKRELIALLRPGVRVPNWSKAAEKNPGRLKRREFVVLEVDKAKGLALQSGEKR CCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHEEEEEEECCCCCCEECCCCCE VEVPWGALENVWRKWRDYRECRLKRKDLAEKNFFTTYCIALLRFLEENLGGPRV EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA