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The map label for this gene is yhbH [C]

Identifier: 55981263

GI number: 55981263

Start: 1234657

End: 1235217

Strand: Reverse

Name: yhbH [C]

Synonym: TTHA1294

Alternate gene names: 55981263

Gene position: 1235217-1234657 (Counterclockwise)

Preceding gene: 55981264

Following gene: 55981262

Centisome position: 66.78

GC content: 66.31

Gene sequence:

>561_bases
ATGAACATCTACAAGCTCATCGGGCGCAACCTGGAGATCACGGACGCCATCCGGGACTACGTGGAGAAGAAGCTCGCCCG
CCTGGACCGCTACCAGGACGGGGAGCTCATGGCCAAGGTGGTCCTTTCCCTGGCGGGAAGCCCCCACGTGGAGAAGAAGG
CCCGGGCGGAGATCCAGGTGGACCTCCCGGGCGGCCTCGTGCGCGTGGAGGAGGAGGACGCCGACCTCTACGCCGCCATA
GACCGGGCGGTGGACCGCCTGGAAACCCAGGTGAAGCGCTTCAGGGAGCGGCGCTACGTGGGCAAGCGCCACTCCTACCA
GGGCCCCCCGCCTCCCGAGGTGCGGGACCTCGAGGCCCTGCGCAAGCCCGAGGAAGAGGAAGGCCCCAGGATCGTCCGCG
TCAAGCGCTTTGAGATGAAGCCCATGGACCCCGAGGAGGCCGCCTTCCAGATGGAGGCCCTGGGCCACAGCTTCTTCGTC
TTCCGCAACGCCAAGACCGACGAGATCAACGTCATCTACCGGAGGAAGGACGGCAACTACGGCCTTATAGAGCCCGCCTG
A

Upstream 100 bases:

>100_bases
TGGTCTTGAAGGCCGGCCAGGTGGTGCGGGACGAGCGTCCCGCGGAGGGTGGTAGCATAAGGGTACGGGAAGGCCCTCCC
CGGGGCGGAAAGGAGGAAGG

Downstream 100 bases:

>100_bases
GCTCCAGGCCACCTTCGCCCCGGGGCCGGTGGCGGTAGACTGGCCCCGGGGAGGTCTTATGCCCAGGCTCCGCCGCTTGG
AGGACCTTCTGCCCCACATC

Product: ribosomal subunit interface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVEKKARAEIQVDLPGGLVRVEEEDADLYAAI
DRAVDRLETQVKRFRERRYVGKRHSYQGPPPPEVRDLEALRKPEEEEGPRIVRVKRFEMKPMDPEEAAFQMEALGHSFFV
FRNAKTDEINVIYRRKDGNYGLIEPA

Sequences:

>Translated_186_residues
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVEKKARAEIQVDLPGGLVRVEEEDADLYAAI
DRAVDRLETQVKRFRERRYVGKRHSYQGPPPPEVRDLEALRKPEEEEGPRIVRVKRFEMKPMDPEEAAFQMEALGHSFFV
FRNAKTDEINVIYRRKDGNYGLIEPA
>Mature_186_residues
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVEKKARAEIQVDLPGGLVRVEEEDADLYAAI
DRAVDRLETQVKRFRERRYVGKRHSYQGPPPPEVRDLEALRKPEEEEGPRIVRVKRFEMKPMDPEEAAFQMEALGHSFFV
FRNAKTDEINVIYRRKDGNYGLIEPA

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21569; Mature: 21569

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVEKKARAEIQV
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEE
DLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFRERRYVGKRHSYQGPPPPEVRDLEAL
ECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RKPEEEEGPRIVRVKRFEMKPMDPEEAAFQMEALGHSFFVFRNAKTDEINVIYRRKDGNY
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCC
GLIEPA
CCCCCC
>Mature Secondary Structure
MNIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVEKKARAEIQV
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEE
DLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFRERRYVGKRHSYQGPPPPEVRDLEAL
ECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RKPEEEEGPRIVRVKRFEMKPMDPEEAAFQMEALGHSFFVFRNAKTDEINVIYRRKDGNY
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECCCC
GLIEPA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]