| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981237
Identifier: 55981237
GI number: 55981237
Start: 1210384
End: 1211028
Strand: Reverse
Name: 55981237
Synonym: TTHA1268
Alternate gene names: NA
Gene position: 1211028-1210384 (Counterclockwise)
Preceding gene: 55981239
Following gene: 55981234
Centisome position: 65.47
GC content: 68.68
Gene sequence:
>645_bases GTGTGCCCCCCTATTAAACACGGGCCCTTACACATAAATCCTTACACGACCGCCAGGAACGCCCAGGCGGCCCTGGAGTA CGTCTTCCGCAACCACACGAACCCGGAGCGGGTCTTCGTCACGGGGTGCAGCGCCGGGGCCTACGGGGCGGTGCTTTGGG CGGACAAGATCCTCGCCACCTACAAAAACGCCCAGATCGCGGTCTGCGGCGACGCCGGGGTGGGGGTGGTCACGGAGGAC TTCCCGGGCTTTACCGCCTGGAACCCGCGCCTCCCCGAGCTTCCCGGCCTCTCCTCCCCGCCCAAGGTCTCGGAGATCTA CCGCGCCTTGGCCCAGGCCTACCCCAAGGCGGTCCTCGCCCAGTACACCACCCTCCTGGACGGGACCCAGATCTACTTCT ACGCCCTCATGAAGAAGGAGGCCGCCCCCAGCGAGGCCACGGCCCGGGAGTGGGCCGTGGCGGCCGAGCGGGCGGTGGGT TTCCCGGCCTCGGAGGCCAACTACACCTACTACCTCGCCCCGGGGAGCCAGCACTGCATCCTCCCCCGGCCCGAGCTTTA CACCCTGAAGGTGGGGGAGGTGAGCTTCCTGGACTGGCTTAGGGCGCTTGCCGAGGGGAGGACGCCCCCCCGGGTGCGGC CTTGA
Upstream 100 bases:
>100_bases CCAGAACCGTCTGCAGAACCTCGGCTACTGTCTCCCGCACCGCTTCCCTCAGCAAGATCCGCAAGGTATCCTGGTCCACG GGGCACCTCCTCGTGCTAAG
Downstream 100 bases:
>100_bases GGCCGAAGCCCCGGAACCACTCCCTGAGCTCCGGGTAGCGCTCCACGAGGAGGCGGTGCCCCCGCTTCCGGTCCAGGGGG GCCGCCTCCAGGAGGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MCPPIKHGPLHINPYTTARNAQAALEYVFRNHTNPERVFVTGCSAGAYGAVLWADKILATYKNAQIAVCGDAGVGVVTED FPGFTAWNPRLPELPGLSSPPKVSEIYRALAQAYPKAVLAQYTTLLDGTQIYFYALMKKEAAPSEATAREWAVAAERAVG FPASEANYTYYLAPGSQHCILPRPELYTLKVGEVSFLDWLRALAEGRTPPRVRP
Sequences:
>Translated_214_residues MCPPIKHGPLHINPYTTARNAQAALEYVFRNHTNPERVFVTGCSAGAYGAVLWADKILATYKNAQIAVCGDAGVGVVTED FPGFTAWNPRLPELPGLSSPPKVSEIYRALAQAYPKAVLAQYTTLLDGTQIYFYALMKKEAAPSEATAREWAVAAERAVG FPASEANYTYYLAPGSQHCILPRPELYTLKVGEVSFLDWLRALAEGRTPPRVRP >Mature_214_residues MCPPIKHGPLHINPYTTARNAQAALEYVFRNHTNPERVFVTGCSAGAYGAVLWADKILATYKNAQIAVCGDAGVGVVTED FPGFTAWNPRLPELPGLSSPPKVSEIYRALAQAYPKAVLAQYTTLLDGTQIYFYALMKKEAAPSEATAREWAVAAERAVG FPASEANYTYYLAPGSQHCILPRPELYTLKVGEVSFLDWLRALAEGRTPPRVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23416; Mature: 23416
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPPIKHGPLHINPYTTARNAQAALEYVFRNHTNPERVFVTGCSAGAYGAVLWADKILAT CCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH YKNAQIAVCGDAGVGVVTEDFPGFTAWNPRLPELPGLSSPPKVSEIYRALAQAYPKAVLA HCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QYTTLLDGTQIYFYALMKKEAAPSEATAREWAVAAERAVGFPASEANYTYYLAPGSQHCI HHHHHHCCCCEEEHEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEE LPRPELYTLKVGEVSFLDWLRALAEGRTPPRVRP CCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MCPPIKHGPLHINPYTTARNAQAALEYVFRNHTNPERVFVTGCSAGAYGAVLWADKILAT CCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH YKNAQIAVCGDAGVGVVTEDFPGFTAWNPRLPELPGLSSPPKVSEIYRALAQAYPKAVLA HCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QYTTLLDGTQIYFYALMKKEAAPSEATAREWAVAAERAVGFPASEANYTYYLAPGSQHCI HHHHHHCCCCEEEHEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEE LPRPELYTLKVGEVSFLDWLRALAEGRTPPRVRP CCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA