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The map label for this gene is recJ [H]

Identifier: 55981136

GI number: 55981136

Start: 1109423

End: 1111423

Strand: Direct

Name: recJ [H]

Synonym: TTHA1167

Alternate gene names: 55981136

Gene position: 1109423-1111423 (Clockwise)

Preceding gene: 55981135

Following gene: 55981137

Centisome position: 59.98

GC content: 72.81

Gene sequence:

>2001_bases
ATGAGGGACCGGGTCCGCTGGCGGGTGCTTTCCCTCCCTCCCCTCGCCCAGTGGCGGGAGGTGATGGCGGCCTTGGAGGT
GGGGCCGGAGGCCGCCCTGGCCTACTGGCACCGGGGCTTTAGGCGCAAGGAGGACCTGGACCCCCCCCTCGCCCTCCTTC
CCCTCAAGGGCCTGAGGGAGGCGGCGGCCCTCCTGGAGGAGGCGCTCCGCCAGGGGAAGCGGATCCGCGTCCACGGGGAC
TACGACGCCGACGGGCTCACGGGCACGGCCATCCTGGTTCGGGGCCTCGCCGCCTTGGGCGCCGACGTCCACCCCTTCAT
CCCCCACCGGCTGGAGGAAGGGTACGGGGTGCTGATGGAGCGGGTTCCCGAGCACCTCGAGGCCTCGGACCTCTTCCTCA
CCGTGGACTGCGGGATCACGAACCACGCCGAGCTCAGGGAGCTTTTGGAAAACGGGGTGGAGGTGATCGTCACCGACCAC
CACACCCCCGGCAAGACCCCTCCCCCCGGCCTCGTGGTCCACCCCGCCCTCACCCCGGACCTTAAGGAGAAGCCCACGGG
GGCGGGGGTGGCCTTCCTCCTCCTCTGGGCCCTCCACGAGCGCCTGGGCCTTCCCCCACCCCTGGAGTACGCCGACCTCG
CCGCGGTGGGCACCATCGCCGACGTGGCCCCCCTTTGGGGCTGGAACCGGGCCTTGGTGAAGGAGGGCCTGGCCCGCATC
CCCGCCTCCTCCTGGGTTGGGCTCAGGCTTCTGGCCGAGGCGGTGGGGTACACGGGGAAGGCGGTGGAGGTGGCCTTCCG
CATCGCCCCCCGGATCAACGCGGCAAGCCGCCTCGGGGAGGCTGAGAAGGCCCTAAGGCTCCTCCTCACCGACGACGCGG
CCGAGGCCCAGGCCCTCGTGGGGGAACTCCACCGGCTGAACGCCCGCCGCCAGACCCTGGAGGAGGCCATGCTCAGGAAG
CTCCTCCCCCAGGCGGACCCCGAGGCCAAGGCCATCGTCCTCCTGGACCCCGAGGGGCACCCGGGGGTGATGGGCATCGT
GGCGAGCCGCATCCTGGAGGCCACCCTCCGGCCCGTCTTCCTGGTGGCCCAGGGCAAGGGGACGGTGCGGAGCCTCGCCC
CCATCAGCGCCGTGGAGGCCCTAAGGAGCGCCGAGGACCTTTTGTTGCGCTACGGGGGGCACAAGGAGGCGGCGGGCTTC
GCCATGGACGAGGCCCTCTTCCCCGCCTTCAAGGCCCGGGTGGAGGCCTACGCCGCCCGCTTCCCCGACCCCGTGCGCGA
GGTGGCCCTTTTGGACCTGCTTCCGGAGCCCGGCCTCCTCCCCCAGGTCTTCCGGGAGCTCGCCCTTTTGGAGCCCTACG
GCGAGGGAAACCCCGAGCCCCTCTTCCTCCTCTTCGGCGCCCCGGAGGAGGCCCGGCGCCTCGGGGAGGGCCGCCACCTC
GCCTTCCGCCTGAAGGGGGTGCGGGTCCTGGCCTGGAAACAGGGGGACCTCGCCCTGCCCCCGGAGGTGGAGGTGGCGGG
CCTCCTCAGCGAAAACGCCTGGAACGGCCACCTCGCCTACGAGGTCCAGGCGGTGGACCTGCGAAAGCCAGAGGCGCTGG
AGGGCGGGATCGCGCCCTTCGCCTACCCCCTGCCCCTCCTCGAGGCCCTGGCCCGGGCCCGCCTGGGGGAAGGGGTCTAC
GTCCCCGAGGACAACCCTGAGGGGCTGGACTACGCCTGGAAGGCGGGCTTCCGCCTCCTCCCCCCCGAGGAGGCCGGGCT
TTGGCTCGGCCTCCCCCCAAGGCCGGTCCTGGGCAGGCGGGTGGAGGTGGCCCTGGGGCGGGAGGCGCGGGCCAGGCTTT
CCGCCCCCCCCGTCCTCCACACCCCCGAGGCCCGGCTCAAAGCCCTCGTCCACCGCCGCCTCCTCTTCGCCTACGAGCGC
CGTCACCCGGGCCTCTTCAGCGAGGCCCTCCTCGCCTACTGGGAGGTGAACCGTGTACAGGAGCCCGCGGGAAGCCCATG
A

Upstream 100 bases:

>100_bases
CCGCCTGGAGGCGGGTCCGGGCCCTGGAGCGGGAGGTGGCCGAGCTGAAAAAGGCGCGCATAGAGGAGATCCCCCGCATC
CCCGACCGGGACCTGGAGGC

Downstream 100 bases:

>100_bases
GGCCCGGATCTACACCGGGGCCTACCGGGTCTACGGGATGATCCACCTGGTGCCCGGGGCGGGCACCGCCGACCTCTTGA
ACCAGGAACGGCCTTACCTC

Product: single-stranded DNA specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLREAAALLEEALRQGKRIRVHGD
YDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDH
HTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARI
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRK
LLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGF
AMDEALFPAFKARVEAYAARFPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHL
AFRLKGVRVLAWKQGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPFAYPLPLLEALARARLGEGVY
VPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRRVEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYER
RHPGLFSEALLAYWEVNRVQEPAGSP

Sequences:

>Translated_666_residues
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLREAAALLEEALRQGKRIRVHGD
YDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDH
HTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARI
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRK
LLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGF
AMDEALFPAFKARVEAYAARFPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHL
AFRLKGVRVLAWKQGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPFAYPLPLLEALARARLGEGVY
VPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRRVEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYER
RHPGLFSEALLAYWEVNRVQEPAGSP
>Mature_666_residues
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLREAAALLEEALRQGKRIRVHGD
YDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDH
HTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARI
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRK
LLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGF
AMDEALFPAFKARVEAYAARFPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHL
AFRLKGVRVLAWKQGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPFAYPLPLLEALARARLGEGVY
VPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRRVEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYER
RHPGLFSEALLAYWEVNRVQEPAGSP

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=492, Percent_Identity=34.5528455284553, Blast_Score=216, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 72866; Mature: 72866

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLRE
CCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
AAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLME
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPD
HHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCC
LKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALV
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCHHHHHHHHHCCCCHHHHHHHH
GELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEE
LVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAAR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHL
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCEE
AFRLKGVRVLAWKQGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPF
EEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCHHHCCCCCCH
AYPLPLLEALARARLGEGVYVPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRR
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEECCCCCCCEEECCCCCCCCCCE
VEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYERRHPGLFSEALLAYWEVNRVQ
EEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
EPAGSP
CCCCCC
>Mature Secondary Structure
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLRE
CCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
AAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLME
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPD
HHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCC
LKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARI
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALV
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCHHHHHHHHHCCCCHHHHHHHH
GELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEE
LVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAAR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHL
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCCCEE
AFRLKGVRVLAWKQGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPF
EEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCHHHCCCCCCH
AYPLPLLEALARARLGEGVYVPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRR
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHCCCEECCCCCCCEEECCCCCCCCCCE
VEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYERRHPGLFSEALLAYWEVNRVQ
EEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
EPAGSP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]