| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hisA [H]
Identifier: 55981134
GI number: 55981134
Start: 1108414
End: 1109121
Strand: Direct
Name: hisA [H]
Synonym: TTHA1165
Alternate gene names: 55981134
Gene position: 1108414-1109121 (Clockwise)
Preceding gene: 55981133
Following gene: 55981135
Centisome position: 59.92
GC content: 74.58
Gene sequence:
>708_bases ATGCGCCTCATCCCGGCGGTGGACCTGAAGTCGGGCAAGGCGGTGCGCCTCTACGAGGGGGACCCCGCCCGGGAGACCCC CTACGGGGACCCGGTGGAGGCCGCGCTGCGCTTCCAGGAGGAAGGGGCCACCCTCCTCCACCTGGTGGACCTGGACCGCG CCCTGGGCACGGGGGAGAACCGGGAGGTGGTGCGCCGGGTGGCGGCCTCCCTCTCCATCCCCTTCCAGCTCGCGGGGGGC ATCCGGAGCCTCGAGGCCCTGCAGGAGGCCCTCTCCCTGGGGGCGAGCCGGGCGGTGGTGGGCACGGTGGCCGTGAAGGA CCCGGGGCTTCTGGCGCGGATGCTGGAAGCGGTGGGCCCGGACCGCCTGGCCGTGGCCCTGGACGCCCGGGGCCTGGAGG TGGTGGTCTCGGGCTGGCAGGAGGCCGTCTCCGCCTCCGCCCTGGACCTCCTCCGGGCCTGGGCGGAAATGGGGGTGCGG ACCCTCCTCTACACCGACGTCCGCCGGGACGGGACCCTCTTGGGCCTGGACCGGGAGGTGGTGGCCCGGGTGCGGGCGGC CTGGCCCTACGAGCTCATCGTGGGGGGAGGGATCGCCTCCCCGGAGGACCTCCACCTGCTCCAGGCCCTGGGCGTGGACG GCGCTTTGGTGGGCAAGGCCCTCTACGAGGGCCGGATCCGGCTAAAGGAGGCGTCATGGCGCTCGTGA
Upstream 100 bases:
>100_bases AAAGCTCTGGAGGGGCTTTTTGACGCCGTCCTCATCGGCACGAGCTTGATGCGGGCGCCCGATCTGGAGGCCGCCTTAAG GGAGCTTGTAGGATAGGACC
Downstream 100 bases:
>100_bases ACTGGCTCCTTTTGGTGTCGGGGCTTCTCGTGGCGGGCACGGGGCTTTACCTCTACGGGACCTACCCCTTCCTCGCCCTC CCCACCCCCTGGGGCCCCTG
Product: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRALGTGENREVVRRVAASLSIPFQLAGG IRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVGPDRLAVALDARGLEVVVSGWQEAVSASALDLLRAWAEMGVR TLLYTDVRRDGTLLGLDREVVARVRAAWPYELIVGGGIASPEDLHLLQALGVDGALVGKALYEGRIRLKEASWRS
Sequences:
>Translated_235_residues MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRALGTGENREVVRRVAASLSIPFQLAGG IRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVGPDRLAVALDARGLEVVVSGWQEAVSASALDLLRAWAEMGVR TLLYTDVRRDGTLLGLDREVVARVRAAWPYELIVGGGIASPEDLHLLQALGVDGALVGKALYEGRIRLKEASWRS >Mature_235_residues MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRALGTGENREVVRRVAASLSIPFQLAGG IRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVGPDRLAVALDARGLEVVVSGWQEAVSASALDLLRAWAEMGVR TLLYTDVRRDGTLLGLDREVVARVRAAWPYELIVGGGIASPEDLHLLQALGVDGALVGKALYEGRIRLKEASWRS
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=36.6255144032922, Blast_Score=140, Evalue=6e-35, Organism=Escherichia coli, GI1788336, Length=244, Percent_Identity=30.327868852459, Blast_Score=85, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 25150; Mature: 25150
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRALGTGEN CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHCCCCC REVVRRVAASLSIPFQLAGGIRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVGP HHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC DRLAVALDARGLEVVVSGWQEAVSASALDLLRAWAEMGVRTLLYTDVRRDGTLLGLDREV CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCHHH VARVRAAWPYELIVGGGIASPEDLHLLQALGVDGALVGKALYEGRIRLKEASWRS HHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCC >Mature Secondary Structure MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRALGTGEN CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHCCCCC REVVRRVAASLSIPFQLAGGIRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVGP HHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC DRLAVALDARGLEVVVSGWQEAVSASALDLLRAWAEMGVRTLLYTDVRRDGTLLGLDREV CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCHHH VARVRAAWPYELIVGGGIASPEDLHLLQALGVDGALVGKALYEGRIRLKEASWRS HHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA