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The map label for this gene is fadF [H]

Identifier: 55981086

GI number: 55981086

Start: 1063217

End: 1065202

Strand: Reverse

Name: fadF [H]

Synonym: TTHA1117

Alternate gene names: 55981086

Gene position: 1065202-1063217 (Counterclockwise)

Preceding gene: 55981088

Following gene: 55981082

Centisome position: 57.59

GC content: 67.12

Gene sequence:

>1986_bases
ATGCTGACCTTAGCGGAGAAAATCCTCTTTATCCTCCTCGCCGCGGGAAGCCTTTATTACGCCTACACGGGCTTCCGCCG
GGTCTACCTCGCCATAAGGCGGGGCCGGCCCGAGGAGCGGTTTGACCGCCTGCCCGAGCGGGTCGGGCGGGCCCTCTGGC
TCGTCCTCACCCAGCAGACCGTGTTCAAGAGGAGGCCCCTCGTCTCCCTCCTCCACGCCTTCGTCTTTTACGGCTTCGTC
TACTACCTCCTCGTGAACCTCGTGGACTTTCTGGAGGGTTTCTTCGGCCTCCACGCCCGGGGAGGCATTTGGAATGCATA
CAATATCGTGGCCGACCTCCTCACCTTCCTGATCCTCGTGGGGATCCTGGGCCTGATGCTCAGGCGCTACCTCCTCGCCC
CCAGGGACTTCACCTGGAACCCCAACGTCCCCCTGCACGAGAAGGCGCGGGCGGGCATCGCCCGGGACTCGGCCATCGTG
GGGGCCTTCATCGCCTTCCACGTGGGAAGCCGCCTCCTCTCCAAGGCCTTCCAGCTTGCGGGTGAAGGCCCGGACCCCTT
CCAGCCCGTGGCGAGCGCCCTCGCCGGGGCGCTTTCCGGCCTTCCCCCCGCCCTCCTCACCTTCGGCGAGCACTTCTTCT
GGTGGGGCGCCCTGGGCTCCATCCTCCTCTTCCTCCCCTACTTCCCCCGCTCCAAGCACATCCACCTCTTCATGGCCCCC
ATCAACCTGGCCTTCCGCAAGGAGGTTCCGGGGGCCCTCACGCCCCTGGACTTTGAGAAGGAGGAGGAGAAGTTCGGGGC
GGAGAAGCTGGAGGACCTCTCCTGGAAGCGGCTCCTTGACGCCTACGCCTGCATCATGTGCAACCGCTGCCAGGAGGCCT
GCCCCGCCTACGCCACGGGAAAGGCCCTAAGCCCGGCCGCCATCCTCATCTCCGAGCGCTACGAGCTGAACGAGATCCTC
CCCCGGTTCGCCCAGGGCGAGGAAAGCCCCAGGCCCCTCATGGACTTCGCCCTGAACGAGGAGGCCCTCTGGGCCTGCAC
CACCTGCCTGGCCTGCGTGGAGGTCTGCCCCGTGGGCAACGAGCCCATGCTCCACATCCTGGACGTGCGCCGGGCCAAGG
TCCTCATGGAGGGGAGCTTCCCCCAGGAGCTCAACAACGCCTTCCGGGGCATGGAGCGCTCGGGGAACCCCTGGGGCATC
GGCCAGGACAAGCGCCTGGACTGGGCGGAAGGGCTCAACGTCCCCACGGTGGAGGAGAAGCCCCACCCCGAGGTCCTCTA
CTGGGTGGGGTGCGCCCCGAGCTACGACCCCCGGGCCCAGAAGATCGCCCGCAGCATGGTGGAGATCCTGAACGCCAGCG
GGGTGGACTGGGCCGTCCTGGGCAGGCGGGAAAAGTGCACCGGGGACGCCGCCAGGCGCGCGGGCAACGAGTACCTCTTC
TTCCAGCTCGCCACGGAGAACGTGGAGACCCTGAACGAGGTGGCCCCCAAGACCATCGTCACCACCTGCCCCCACTGCTT
CCACACCCTGAAGAACGAGTACAAGGACTTCGGCGGCCACTACCGGGTGGTCCACCACACGGAGTTCATCGCCGAGCTCT
TGCGTAAGGGGAAGATCCGGGTGGAGGAGGAAACCCGCAAGGTGGTCTTCCACGACCCCTGCTACCTGGGCCGCCACAAC
GGGGTCTACGAGGCCCCGCGCGAGGTGCTGAAGGGGGTGGGCTTCGCCCTCACCGAGCCTCCCCGGAGCCGGGAGAGGAG
CTTCTGCTGCGGGGCGGGCGGGGCCCAGTTCTGGAAGGAGGAGGAGCCCGGGGCCATGCGTGTTTCCGAGAACCGCTATA
AGGAGCTCAAGGGAACGGGGGCGGAGGTCATCGCCACGGGGTGCCCCTTCTGCATGGCCATGATGAACGTGGAGGTGGCC
CAGGACGAGAAGCCCCTCGAGGTCCTGGACATCGCCGAGCTCGTGGCCCGGGGCCTCAAGGCCTGA

Upstream 100 bases:

>100_bases
ATGAGGAGAAAGGCCGCCGTCTCCATGGCAGGCCATTGTACGCTCTTGCCAAGCCTGGGGTATGGGGTAAACTTTTACCG
AGTATAAGGAGGTGGAGCCC

Downstream 100 bases:

>100_bases
GGTAGACGGCGTAGACCCGGTACCCTTCCATCCACCCCTCCCCAAAGGCCCTTAAGGCCAGGCCCGGGGGAGGGGTGAGG
AGTTCTTCCCCTTCCCAGTA

Product: iron-sulfur protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MLTLAEKILFILLAAGSLYYAYTGFRRVYLAIRRGRPEERFDRLPERVGRALWLVLTQQTVFKRRPLVSLLHAFVFYGFV
YYLLVNLVDFLEGFFGLHARGGIWNAYNIVADLLTFLILVGILGLMLRRYLLAPRDFTWNPNVPLHEKARAGIARDSAIV
GAFIAFHVGSRLLSKAFQLAGEGPDPFQPVASALAGALSGLPPALLTFGEHFFWWGALGSILLFLPYFPRSKHIHLFMAP
INLAFRKEVPGALTPLDFEKEEEKFGAEKLEDLSWKRLLDAYACIMCNRCQEACPAYATGKALSPAAILISERYELNEIL
PRFAQGEESPRPLMDFALNEEALWACTTCLACVEVCPVGNEPMLHILDVRRAKVLMEGSFPQELNNAFRGMERSGNPWGI
GQDKRLDWAEGLNVPTVEEKPHPEVLYWVGCAPSYDPRAQKIARSMVEILNASGVDWAVLGRREKCTGDAARRAGNEYLF
FQLATENVETLNEVAPKTIVTTCPHCFHTLKNEYKDFGGHYRVVHHTEFIAELLRKGKIRVEEETRKVVFHDPCYLGRHN
GVYEAPREVLKGVGFALTEPPRSRERSFCCGAGGAQFWKEEEPGAMRVSENRYKELKGTGAEVIATGCPFCMAMMNVEVA
QDEKPLEVLDIAELVARGLKA

Sequences:

>Translated_661_residues
MLTLAEKILFILLAAGSLYYAYTGFRRVYLAIRRGRPEERFDRLPERVGRALWLVLTQQTVFKRRPLVSLLHAFVFYGFV
YYLLVNLVDFLEGFFGLHARGGIWNAYNIVADLLTFLILVGILGLMLRRYLLAPRDFTWNPNVPLHEKARAGIARDSAIV
GAFIAFHVGSRLLSKAFQLAGEGPDPFQPVASALAGALSGLPPALLTFGEHFFWWGALGSILLFLPYFPRSKHIHLFMAP
INLAFRKEVPGALTPLDFEKEEEKFGAEKLEDLSWKRLLDAYACIMCNRCQEACPAYATGKALSPAAILISERYELNEIL
PRFAQGEESPRPLMDFALNEEALWACTTCLACVEVCPVGNEPMLHILDVRRAKVLMEGSFPQELNNAFRGMERSGNPWGI
GQDKRLDWAEGLNVPTVEEKPHPEVLYWVGCAPSYDPRAQKIARSMVEILNASGVDWAVLGRREKCTGDAARRAGNEYLF
FQLATENVETLNEVAPKTIVTTCPHCFHTLKNEYKDFGGHYRVVHHTEFIAELLRKGKIRVEEETRKVVFHDPCYLGRHN
GVYEAPREVLKGVGFALTEPPRSRERSFCCGAGGAQFWKEEEPGAMRVSENRYKELKGTGAEVIATGCPFCMAMMNVEVA
QDEKPLEVLDIAELVARGLKA
>Mature_661_residues
MLTLAEKILFILLAAGSLYYAYTGFRRVYLAIRRGRPEERFDRLPERVGRALWLVLTQQTVFKRRPLVSLLHAFVFYGFV
YYLLVNLVDFLEGFFGLHARGGIWNAYNIVADLLTFLILVGILGLMLRRYLLAPRDFTWNPNVPLHEKARAGIARDSAIV
GAFIAFHVGSRLLSKAFQLAGEGPDPFQPVASALAGALSGLPPALLTFGEHFFWWGALGSILLFLPYFPRSKHIHLFMAP
INLAFRKEVPGALTPLDFEKEEEKFGAEKLEDLSWKRLLDAYACIMCNRCQEACPAYATGKALSPAAILISERYELNEIL
PRFAQGEESPRPLMDFALNEEALWACTTCLACVEVCPVGNEPMLHILDVRRAKVLMEGSFPQELNNAFRGMERSGNPWGI
GQDKRLDWAEGLNVPTVEEKPHPEVLYWVGCAPSYDPRAQKIARSMVEILNASGVDWAVLGRREKCTGDAARRAGNEYLF
FQLATENVETLNEVAPKTIVTTCPHCFHTLKNEYKDFGGHYRVVHHTEFIAELLRKGKIRVEEETRKVVFHDPCYLGRHN
GVYEAPREVLKGVGFALTEPPRSRERSFCCGAGGAQFWKEEEPGAMRVSENRYKELKGTGAEVIATGCPFCMAMMNVEVA
QDEKPLEVLDIAELVARGLKA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=381, Percent_Identity=23.0971128608924, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 74296; Mature: 74296

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLAEKILFILLAAGSLYYAYTGFRRVYLAIRRGRPEERFDRLPERVGRALWLVLTQQT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFKRRPLVSLLHAFVFYGFVYYLLVNLVDFLEGFFGLHARGGIWNAYNIVADLLTFLILV
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GILGLMLRRYLLAPRDFTWNPNVPLHEKARAGIARDSAIVGAFIAFHVGSRLLSKAFQLA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEGPDPFQPVASALAGALSGLPPALLTFGEHFFWWGALGSILLFLPYFPRSKHIHLFMAP
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
INLAFRKEVPGALTPLDFEKEEEKFGAEKLEDLSWKRLLDAYACIMCNRCQEACPAYATG
CCHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KALSPAAILISERYELNEILPRFAQGEESPRPLMDFALNEEALWACTTCLACVEVCPVGN
CCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
EPMLHILDVRRAKVLMEGSFPQELNNAFRGMERSGNPWGIGQDKRLDWAEGLNVPTVEEK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PHPEVLYWVGCAPSYDPRAQKIARSMVEILNASGVDWAVLGRREKCTGDAARRAGNEYLF
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHCCCCEEE
FQLATENVETLNEVAPKTIVTTCPHCFHTLKNEYKDFGGHYRVVHHTEFIAELLRKGKIR
EEEECCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCE
VEEETRKVVFHDPCYLGRHNGVYEAPREVLKGVGFALTEPPRSRERSFCCGAGGAQFWKE
EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
EEPGAMRVSENRYKELKGTGAEVIATGCPFCMAMMNVEVAQDEKPLEVLDIAELVARGLK
CCCCCEEECHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MLTLAEKILFILLAAGSLYYAYTGFRRVYLAIRRGRPEERFDRLPERVGRALWLVLTQQT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFKRRPLVSLLHAFVFYGFVYYLLVNLVDFLEGFFGLHARGGIWNAYNIVADLLTFLILV
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GILGLMLRRYLLAPRDFTWNPNVPLHEKARAGIARDSAIVGAFIAFHVGSRLLSKAFQLA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEGPDPFQPVASALAGALSGLPPALLTFGEHFFWWGALGSILLFLPYFPRSKHIHLFMAP
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
INLAFRKEVPGALTPLDFEKEEEKFGAEKLEDLSWKRLLDAYACIMCNRCQEACPAYATG
CCHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KALSPAAILISERYELNEILPRFAQGEESPRPLMDFALNEEALWACTTCLACVEVCPVGN
CCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
EPMLHILDVRRAKVLMEGSFPQELNNAFRGMERSGNPWGIGQDKRLDWAEGLNVPTVEEK
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PHPEVLYWVGCAPSYDPRAQKIARSMVEILNASGVDWAVLGRREKCTGDAARRAGNEYLF
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHCCCCEEE
FQLATENVETLNEVAPKTIVTTCPHCFHTLKNEYKDFGGHYRVVHHTEFIAELLRKGKIR
EEEECCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCE
VEEETRKVVFHDPCYLGRHNGVYEAPREVLKGVGFALTEPPRSRERSFCCGAGGAQFWKE
EECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
EEPGAMRVSENRYKELKGTGAEVIATGCPFCMAMMNVEVAQDEKPLEVLDIAELVARGLK
CCCCCEEECHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]