| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55981072
Identifier: 55981072
GI number: 55981072
Start: 1050124
End: 1051146
Strand: Reverse
Name: 55981072
Synonym: TTHA1103
Alternate gene names: NA
Gene position: 1051146-1050124 (Counterclockwise)
Preceding gene: 55981074
Following gene: 55981071
Centisome position: 56.83
GC content: 72.73
Gene sequence:
>1023_bases GTGTGGGAGCTTGCCGAAGTCCAAGAGCCCGAGGCGTGGAACCGCCTGGTCTCGGGCTTCGCCATCACGAGCCCCCTCCA GTCCTGGGGCTGGGGGGAGGTGAAGCGGACCACGGGCTGGGAGCCCCGCCGCTTCCTGCTCCTGGGGGGCGAAGGCCCGG TGGCCGCGGCCCAGGTCCTCCTCAAGGCGGCCCCCGGGGGGCTGCGCCTGGCCTACGCCCCCAGGGGGCCTGCCCTCCAC CGCCTCGAGGACCTGCCCGAGGTGGCCCGGGCCCTGGGGCGGGCCCTTCGGGCCACCCACCTGGTCCTGGAGCCGGAGGC GGGGCTTCCCGCCCACCTTCCCGCCCCCCGCTTCCCTGGCCTCCTCTTGGAGGAGCCCATCCAGCCCGCCCACTCCCTCT GGCTGGACCTCACCCAGGGGGAGGAGGCCCTCCTCAAGGGGATGAAGGAGATGCACCGCCGGAACGCCCGGCTCGCCCTC AAGCGGGTGGCCCTTTCCGTGGAGGGGGAGGAGGCCTTCGCGGAGTTCTACCGCCTCTTCACGGAGACCAACCGGAGGGC CCGGCTCCTCCAGCACGACGAGGCCTACTACCGGGCGGTCCTCAAGGAGATGAACCAGCCCTTGGGGGAGGCCTTCCTCG CCCTGGCGCGGAAGGACGGGGAGGCCCTGGCGGCGGGCCTCTTCGTGGCCTTCGCCGGCAAGGTGGCCTACCTCTACGGC GGCAGCACCCGCAAGCACCCCGAGGCCAAGGCCCCCATGGGCATGCACCTCGCCGCCATCCGGCACGGGATGGCCCGGGG CTACCGCGTCTACGACCTTTGGGGCATCCCCAAAAACCCCCGGGGGAGCCACGCCGAGGGGATCCACCGCTTCAAGGAGG GGTTCGGGGGCCAGCGGGTCCAGTTTCCCGCCTACGTCCTGCCCCTCTCCCCCCTCTACCGCCCCCTAGGGCTCCTCCTC CGCCTGAGGAAGACCTGGGTCAACCTGCGGGTGCGGGGCAACCCTCGGGACGTCCTTGGCTGA
Upstream 100 bases:
>100_bases TGTAGGCCCCCGCCGTGCCCTGGAAGGCGATCCTCATGGTTCCCATGGTACACGGGCCCGCCTTCTGGAAGACCGGGTCC GGGCCATGTAGGCTTGAGGG
Downstream 100 bases:
>100_bases GCGTCATCTTTCTCAAGCGCCTTTCGCTATCGTGGGGGCGTGGTGCGGCTTCTCCTCCTCCTTCTCGCCCTAGGCCTCGC CTTCGTCCTTTGGCCCCGTC
Product: FemA-like protein
Products: NA
Alternate protein names: FemAB Family Protein; FemA-Related Protein; Protein FemA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MWELAEVQEPEAWNRLVSGFAITSPLQSWGWGEVKRTTGWEPRRFLLLGGEGPVAAAQVLLKAAPGGLRLAYAPRGPALH RLEDLPEVARALGRALRATHLVLEPEAGLPAHLPAPRFPGLLLEEPIQPAHSLWLDLTQGEEALLKGMKEMHRRNARLAL KRVALSVEGEEAFAEFYRLFTETNRRARLLQHDEAYYRAVLKEMNQPLGEAFLALARKDGEALAAGLFVAFAGKVAYLYG GSTRKHPEAKAPMGMHLAAIRHGMARGYRVYDLWGIPKNPRGSHAEGIHRFKEGFGGQRVQFPAYVLPLSPLYRPLGLLL RLRKTWVNLRVRGNPRDVLG
Sequences:
>Translated_340_residues MWELAEVQEPEAWNRLVSGFAITSPLQSWGWGEVKRTTGWEPRRFLLLGGEGPVAAAQVLLKAAPGGLRLAYAPRGPALH RLEDLPEVARALGRALRATHLVLEPEAGLPAHLPAPRFPGLLLEEPIQPAHSLWLDLTQGEEALLKGMKEMHRRNARLAL KRVALSVEGEEAFAEFYRLFTETNRRARLLQHDEAYYRAVLKEMNQPLGEAFLALARKDGEALAAGLFVAFAGKVAYLYG GSTRKHPEAKAPMGMHLAAIRHGMARGYRVYDLWGIPKNPRGSHAEGIHRFKEGFGGQRVQFPAYVLPLSPLYRPLGLLL RLRKTWVNLRVRGNPRDVLG >Mature_340_residues MWELAEVQEPEAWNRLVSGFAITSPLQSWGWGEVKRTTGWEPRRFLLLGGEGPVAAAQVLLKAAPGGLRLAYAPRGPALH RLEDLPEVARALGRALRATHLVLEPEAGLPAHLPAPRFPGLLLEEPIQPAHSLWLDLTQGEEALLKGMKEMHRRNARLAL KRVALSVEGEEAFAEFYRLFTETNRRARLLQHDEAYYRAVLKEMNQPLGEAFLALARKDGEALAAGLFVAFAGKVAYLYG GSTRKHPEAKAPMGMHLAAIRHGMARGYRVYDLWGIPKNPRGSHAEGIHRFKEGFGGQRVQFPAYVLPLSPLYRPLGLLL RLRKTWVNLRVRGNPRDVLG
Specific function: Unknown
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37904; Mature: 37904
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWELAEVQEPEAWNRLVSGFAITSPLQSWGWGEVKRTTGWEPRRFLLLGGEGPVAAAQVL CCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH LKAAPGGLRLAYAPRGPALHRLEDLPEVARALGRALRATHLVLEPEAGLPAHLPAPRFPG HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC LLLEEPIQPAHSLWLDLTQGEEALLKGMKEMHRRNARLALKRVALSVEGEEAFAEFYRLF CHHHCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TETNRRARLLQHDEAYYRAVLKEMNQPLGEAFLALARKDGEALAAGLFVAFAGKVAYLYG HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEC GSTRKHPEAKAPMGMHLAAIRHGMARGYRVYDLWGIPKNPRGSHAEGIHRFKEGFGGQRV CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEE QFPAYVLPLSPLYRPLGLLLRLRKTWVNLRVRGNPRDVLG ECCEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure MWELAEVQEPEAWNRLVSGFAITSPLQSWGWGEVKRTTGWEPRRFLLLGGEGPVAAAQVL CCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHH LKAAPGGLRLAYAPRGPALHRLEDLPEVARALGRALRATHLVLEPEAGLPAHLPAPRFPG HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC LLLEEPIQPAHSLWLDLTQGEEALLKGMKEMHRRNARLALKRVALSVEGEEAFAEFYRLF CHHHCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TETNRRARLLQHDEAYYRAVLKEMNQPLGEAFLALARKDGEALAAGLFVAFAGKVAYLYG HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEC GSTRKHPEAKAPMGMHLAAIRHGMARGYRVYDLWGIPKNPRGSHAEGIHRFKEGFGGQRV CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEE QFPAYVLPLSPLYRPLGLLLRLRKTWVNLRVRGNPRDVLG ECCEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA