| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yhgH [C]
Identifier: 55981040
GI number: 55981040
Start: 1020429
End: 1021046
Strand: Reverse
Name: yhgH [C]
Synonym: TTHA1071
Alternate gene names: 55981040
Gene position: 1021046-1020429 (Counterclockwise)
Preceding gene: 55981041
Following gene: 55981035
Centisome position: 55.2
GC content: 75.4
Gene sequence:
>618_bases GTGCCTTGGGGCTGGATTGAAGCCTTGCTGGGCCACGCCTGCCCGGGGTGCGGGGGGCCCTTGGACCTTCCCGCCCTCTG CGGGCGTTGCCGGGCGGGCCTCGAGGCCTTCTCCACGGGGGAGATGGTTTACCTGGGCCACTACGCCCGGGTGGGCCCCT TGGTGCGGGCGCTGAAGTACGGGAGACGGGAGGCCTTGGCCCGGGCGCTGGCCGAGCCCCTGGCCCGGGCCGTGGCCGCG AGGGGGTGGCGGCTCCAGGGCGTCACGGCGGTGCCCACCCTGCCCCACCGGCTCGCCCTCAGGGGCTACAACCCGCCCGA GGTTTTGGCCCGGGCCCTCGCCAAGGCCCTAGGGGTGCCCTACCGCCCGGTGCTCTTCCGGAGGCGGTACACCCCGGGCC AGCCCACCCGGGGCTTCAAGGAGCGCCGCTTCCTCCCGGGCGACCTCTTCGGGGCCCGGGTGCGGGTGGAGGGGGCCTGG CTTTTGGTGGACGACGTCCTCACCAGCGGGGCCACCTTCCTCCGGGCCCGGGGAGCCCTCCTCGAGGCGGGGGCCGCCCA CGTCTACGGGGCCTTCCTGGCGGTGCGGGACCCCAGGGCCTTGGGGCCTTACCGCTAA
Upstream 100 bases:
>100_bases GCCTACCACCCCGCCTTTGACGTGACCCCCCATCGGTACCTCACGGGGATCATCACGGAGAAGGGGGTCCTCTACCCCCC CTTCGCCGAGGGGCTGCGGC
Downstream 100 bases:
>100_bases GCCTTTGCGCCTCGGGCACCCCGCCCCGGCCTCAGTAGTAGGCGCTCGGGTCCACGAAGCGGGTGGCGTCCCCGGTGCGG AGGGCCACGCGGAACTCCAG
Product: competence protein ComF
Products: NA
Alternate protein names: Phosphoribosyltransferase
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPWGWIEALLGHACPGCGGPLDLPALCGRCRAGLEAFSTGEMVYLGHYARVGPLVRALKYGRREALARALAEPLARAVAA RGWRLQGVTAVPTLPHRLALRGYNPPEVLARALAKALGVPYRPVLFRRRYTPGQPTRGFKERRFLPGDLFGARVRVEGAW LLVDDVLTSGATFLRARGALLEAGAAHVYGAFLAVRDPRALGPYR
Sequences:
>Translated_205_residues MPWGWIEALLGHACPGCGGPLDLPALCGRCRAGLEAFSTGEMVYLGHYARVGPLVRALKYGRREALARALAEPLARAVAA RGWRLQGVTAVPTLPHRLALRGYNPPEVLARALAKALGVPYRPVLFRRRYTPGQPTRGFKERRFLPGDLFGARVRVEGAW LLVDDVLTSGATFLRARGALLEAGAAHVYGAFLAVRDPRALGPYR >Mature_204_residues PWGWIEALLGHACPGCGGPLDLPALCGRCRAGLEAFSTGEMVYLGHYARVGPLVRALKYGRREALARALAEPLARAVAAR GWRLQGVTAVPTLPHRLALRGYNPPEVLARALAKALGVPYRPVLFRRRYTPGQPTRGFKERRFLPGDLFGARVRVEGAWL LVDDVLTSGATFLRARGALLEAGAAHVYGAFLAVRDPRALGPYR
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22260; Mature: 22129
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWGWIEALLGHACPGCGGPLDLPALCGRCRAGLEAFSTGEMVYLGHYARVGPLVRALKY CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH GRREALARALAEPLARAVAARGWRLQGVTAVPTLPHRLALRGYNPPEVLARALAKALGVP HHHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCC YRPVLFRRRYTPGQPTRGFKERRFLPGDLFGARVRVEGAWLLVDDVLTSGATFLRARGAL CCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCEEEHHHHHHHCCHHHHHHHHHH LEAGAAHVYGAFLAVRDPRALGPYR HHHCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PWGWIEALLGHACPGCGGPLDLPALCGRCRAGLEAFSTGEMVYLGHYARVGPLVRALKY CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH GRREALARALAEPLARAVAARGWRLQGVTAVPTLPHRLALRGYNPPEVLARALAKALGVP HHHHHHHHHHHHHHHHHHHHCCCEECCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHCCC YRPVLFRRRYTPGQPTRGFKERRFLPGDLFGARVRVEGAWLLVDDVLTSGATFLRARGAL CCHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCEEEHHHHHHHCCHHHHHHHHHH LEAGAAHVYGAFLAVRDPRALGPYR HHHCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA