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The map label for this gene is 55981024

Identifier: 55981024

GI number: 55981024

Start: 999359

End: 1000555

Strand: Reverse

Name: 55981024

Synonym: TTHA1055

Alternate gene names: NA

Gene position: 1000555-999359 (Counterclockwise)

Preceding gene: 55981028

Following gene: 55981018

Centisome position: 54.09

GC content: 64.58

Gene sequence:

>1197_bases
ATGCTCAGTATGTTGAGCAAAATCTCCTTCACCCGTCCCCAGGCCCAGGAGCTCCTAAGGCGGCTCCAGGCGCCCCGCCA
CCTCCTCCAGGTGGTGCTGGGCCCCAGGCAGGTGGGCAAGACCACCCTTGCCCTGCAGGTGGCCCAGACCTGCGGTCTCC
CCTACCACTACGCCTCCGCCGACGAACCCACCCTCAAGGAAGCCCCCTGGCTGGAAACCCAGTGGACCCTAGCCCGCCGC
CTGGCGCAGGCGGGGGAAGCCCTCCTGGTCTTGGACGAAGCCCAGAAGGTGCTGGGCTGGTCGGAAACCCTCAAGCGCCT
CTGGGACGAGGACACCCTACGGGGCCTTCCCCTAAAGGTGGTCCTCCTGGGCTCCTCTCCCCTGCTTCTGCAAAAGGGCC
TTTCCGAAAGCCTCGCCGGCCGCTTTGAGGTCCTTCACCTCCCTCACTGGAGCTTTTACGAGATGGAGCGAGCCTTCGGG
TACACCCTCCCCGAGTACCTCTACTTCGGGGGTTACCCGGGCGCGGCCCCCCTGCGGGAAGAGCCCGAGAGGTTCGCTCG
CTACATCAAAGACGCCCTTTTAGAAACCACCCTGGGACGCGATATCCTGCTCCACACCCGGGTGGAGAAACCCGCCCTCC
TCCGAAGGGTCTTGGAGCTTGGCCTCCTCTACAGCGGCCAGGTGCTCTCCTACACAAAGATGCTGGGGCAACTCCAGGAC
GCTGGGAACACGGTGACCTTGGCCTATTACCTGGAGCTCTTGGAAGGGGCGGGCCTTCTCGGTGCCCTGCAAAAGTACGC
CGCCGAGCCCATCCGGCGCCGGGCCTCGAGCCCAAAGCTCCTGGCCCTTAACACGGGACTCATCACGGCCGTCCTGGGGC
TCTCCCCAGAGGAGGTGTGGGAGGACGCCGCCCTCATGGGGCGGCTCGTAGAAACCGCCGTGGGCGCCCACCTTCTGGCC
CACGCGCACCAGGGGGGCTTTGAGGTGTACTACTGGCGGGAAAGGGACCAGGAAGTGGACTTTGTCCTTCAAAAGGGAAA
GCGCCTCCTGGCCCTCGAGGTCAAAAGCGCCCCCTCAAAAAGAACCCAGGGCCTGGAAGCCTTCACCCGCACCTTTGGGG
CTAAAGGCCTCCTGGTAGGCCCAGAGGGCGTTCCCCTGGAGGCGTTTCTGAGGGACAACCCCTTGAACTTCCTCTAA

Upstream 100 bases:

>100_bases
GGCCACTATACCAGGGCCCGTGGGGCGGGTGGGACGAACCCTCCGCCGGGTGCTCTTACCCAGGGCCCGCCTCTTGATTT
ACTCAATGTGCTGAGTAAAA

Downstream 100 bases:

>100_bases
ACGGCAGGGCCCCCCTAACCCTTGGCGGAAAGCCAGTCCTCCCCCATCCCCACCTCCACCTCCAGGGGCACGGCGAGGGG
ATAGGCCTTCTCCATGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLSMLSKISFTRPQAQELLRRLQAPRHLLQVVLGPRQVGKTTLALQVAQTCGLPYHYASADEPTLKEAPWLETQWTLARR
LAQAGEALLVLDEAQKVLGWSETLKRLWDEDTLRGLPLKVVLLGSSPLLLQKGLSESLAGRFEVLHLPHWSFYEMERAFG
YTLPEYLYFGGYPGAAPLREEPERFARYIKDALLETTLGRDILLHTRVEKPALLRRVLELGLLYSGQVLSYTKMLGQLQD
AGNTVTLAYYLELLEGAGLLGALQKYAAEPIRRRASSPKLLALNTGLITAVLGLSPEEVWEDAALMGRLVETAVGAHLLA
HAHQGGFEVYYWRERDQEVDFVLQKGKRLLALEVKSAPSKRTQGLEAFTRTFGAKGLLVGPEGVPLEAFLRDNPLNFL

Sequences:

>Translated_398_residues
MLSMLSKISFTRPQAQELLRRLQAPRHLLQVVLGPRQVGKTTLALQVAQTCGLPYHYASADEPTLKEAPWLETQWTLARR
LAQAGEALLVLDEAQKVLGWSETLKRLWDEDTLRGLPLKVVLLGSSPLLLQKGLSESLAGRFEVLHLPHWSFYEMERAFG
YTLPEYLYFGGYPGAAPLREEPERFARYIKDALLETTLGRDILLHTRVEKPALLRRVLELGLLYSGQVLSYTKMLGQLQD
AGNTVTLAYYLELLEGAGLLGALQKYAAEPIRRRASSPKLLALNTGLITAVLGLSPEEVWEDAALMGRLVETAVGAHLLA
HAHQGGFEVYYWRERDQEVDFVLQKGKRLLALEVKSAPSKRTQGLEAFTRTFGAKGLLVGPEGVPLEAFLRDNPLNFL
>Mature_398_residues
MLSMLSKISFTRPQAQELLRRLQAPRHLLQVVLGPRQVGKTTLALQVAQTCGLPYHYASADEPTLKEAPWLETQWTLARR
LAQAGEALLVLDEAQKVLGWSETLKRLWDEDTLRGLPLKVVLLGSSPLLLQKGLSESLAGRFEVLHLPHWSFYEMERAFG
YTLPEYLYFGGYPGAAPLREEPERFARYIKDALLETTLGRDILLHTRVEKPALLRRVLELGLLYSGQVLSYTKMLGQLQD
AGNTVTLAYYLELLEGAGLLGALQKYAAEPIRRRASSPKLLALNTGLITAVLGLSPEEVWEDAALMGRLVETAVGAHLLA
HAHQGGFEVYYWRERDQEVDFVLQKGKRLLALEVKSAPSKRTQGLEAFTRTFGAKGLLVGPEGVPLEAFLRDNPLNFL

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 44433; Mature: 44433

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMLSKISFTRPQAQELLRRLQAPRHLLQVVLGPRQVGKTTLALQVAQTCGLPYHYASA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEECCC
DEPTLKEAPWLETQWTLARRLAQAGEALLVLDEAQKVLGWSETLKRLWDEDTLRGLPLKV
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHCCCHHCCCCCEEE
VLLGSSPLLLQKGLSESLAGRFEVLHLPHWSFYEMERAFGYTLPEYLYFGGYPGAAPLRE
EEECCCHHHHHHCHHHHHCCCEEEEECCCCHHHHHHHHHCCCCHHHHEECCCCCCCCCCC
EPERFARYIKDALLETTLGRDILLHTRVEKPALLRRVLELGLLYSGQVLSYTKMLGQLQD
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AGNTVTLAYYLELLEGAGLLGALQKYAAEPIRRRASSPKLLALNTGLITAVLGLSPEEVW
CCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCHHHHH
EDAALMGRLVETAVGAHLLAHAHQGGFEVYYWRERDQEVDFVLQKGKRLLALEVKSAPSK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCH
RTQGLEAFTRTFGAKGLLVGPEGVPLEAFLRDNPLNFL
HHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MLSMLSKISFTRPQAQELLRRLQAPRHLLQVVLGPRQVGKTTLALQVAQTCGLPYHYASA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCEEECCC
DEPTLKEAPWLETQWTLARRLAQAGEALLVLDEAQKVLGWSETLKRLWDEDTLRGLPLKV
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHCCCHHCCCCCEEE
VLLGSSPLLLQKGLSESLAGRFEVLHLPHWSFYEMERAFGYTLPEYLYFGGYPGAAPLRE
EEECCCHHHHHHCHHHHHCCCEEEEECCCCHHHHHHHHHCCCCHHHHEECCCCCCCCCCC
EPERFARYIKDALLETTLGRDILLHTRVEKPALLRRVLELGLLYSGQVLSYTKMLGQLQD
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AGNTVTLAYYLELLEGAGLLGALQKYAAEPIRRRASSPKLLALNTGLITAVLGLSPEEVW
CCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCHHHHH
EDAALMGRLVETAVGAHLLAHAHQGGFEVYYWRERDQEVDFVLQKGKRLLALEVKSAPSK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCH
RTQGLEAFTRTFGAKGLLVGPEGVPLEAFLRDNPLNFL
HHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]