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The map label for this gene is narP [H]

Identifier: 55980999

GI number: 55980999

Start: 980110

End: 980688

Strand: Direct

Name: narP [H]

Synonym: TTHA1030

Alternate gene names: 55980999

Gene position: 980110-980688 (Clockwise)

Preceding gene: 55980997

Following gene: 55981019

Centisome position: 52.99

GC content: 72.37

Gene sequence:

>579_bases
GTGCGCCTCCTTGTGGCGGACGACCACCCCCTCTTCCGCCTGGGGCTCAAGGCGGCCCTCGAGGCGGAGGGCCTCGAGGT
GGTGGCGGAGGCGGGCACCGGGGAGGAGGCCCTGGTCCAGGCCCTGGAGAAGGCTCCCGACGCCGTCCTCCTGGACCTGC
GCATGCCGGGGATGGACGGCCTCACCTGCGCCCGGCGCCTGCGGGAGATGGGCTACCGCGGCCTCGTCATCCTCCTCACC
ACCTACCAGGAGCCCGCCCTCCTCCTGGAGGCCTACAAGGCGGGGGCCGACGCCTACCTCTCCAAGGAGCTCTCGGCCCC
GGAGCTCAAGCGGCGGCTTCTCCGGATCCGTCAGGGCGAGGAGCGGCTCACCGCCCCCGACATCCCGGCCCTCACCCCGC
GGGAAGAAGAGGTGCTCCGCCTCCTGGCCGAGGGCCTTTCCACCAAGGAGATCGCCCGGGCCCTTCGCCTCTCCCCGGAG
ACGGTGCGGAGCCACCTGGAAAGCCTCTACGCCAAGCTGGAGGCCCGCAACCGGGTGGAGGCCCTCTCCCGGGCCCGGTC
TTTGGGCTTCCTTCCCTAA

Upstream 100 bases:

>100_bases
CTCTGCGAGCACGTGCTCCGAGGCCCGGCCGGAAAGCTCGGCCAGCTGGTTCAGGGTAAGGGGCATGCCCTAAGTATACG
CCGGGGCTTAGGATGGAAGC

Downstream 100 bases:

>100_bases
GCCGAAGGGGGGCGGNCAAGCCGACCCCCACCCCGCGCTCCCTTTACTCCTGGGAAGCCTTGGGCTCCTGGGCCTTCTGG
GCCTCCTCCTTGGCGGCCCG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRLLVADDHPLFRLGLKAALEAEGLEVVAEAGTGEEALVQALEKAPDAVLLDLRMPGMDGLTCARRLREMGYRGLVILLT
TYQEPALLLEAYKAGADAYLSKELSAPELKRRLLRIRQGEERLTAPDIPALTPREEEVLRLLAEGLSTKEIARALRLSPE
TVRSHLESLYAKLEARNRVEALSRARSLGFLP

Sequences:

>Translated_192_residues
MRLLVADDHPLFRLGLKAALEAEGLEVVAEAGTGEEALVQALEKAPDAVLLDLRMPGMDGLTCARRLREMGYRGLVILLT
TYQEPALLLEAYKAGADAYLSKELSAPELKRRLLRIRQGEERLTAPDIPALTPREEEVLRLLAEGLSTKEIARALRLSPE
TVRSHLESLYAKLEARNRVEALSRARSLGFLP
>Mature_192_residues
MRLLVADDHPLFRLGLKAALEAEGLEVVAEAGTGEEALVQALEKAPDAVLLDLRMPGMDGLTCARRLREMGYRGLVILLT
TYQEPALLLEAYKAGADAYLSKELSAPELKRRLLRIRQGEERLTAPDIPALTPREEEVLRLLAEGLSTKEIARALRLSPE
TVRSHLESLYAKLEARNRVEALSRARSLGFLP

Specific function: Could activate the expression of a formate dehydrogenase operon and could repress the transcription of the fumarate reductase (frdABCD) operon [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=38.1909547738693, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1788222, Length=199, Percent_Identity=31.6582914572864, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1787473, Length=198, Percent_Identity=35.3535353535354, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790102, Length=185, Percent_Identity=37.8378378378378, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=25.5, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788546, Length=218, Percent_Identity=33.9449541284404, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788712, Length=204, Percent_Identity=24.0196078431373, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1789937, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=36.697247706422, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786911, Length=126, Percent_Identity=36.5079365079365, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789402, Length=115, Percent_Identity=39.1304347826087, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21249; Mature: 21249

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVADDHPLFRLGLKAALEAEGLEVVAEAGTGEEALVQALEKAPDAVLLDLRMPGMDG
CEEEEECCCCHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCH
LTCARRLREMGYRGLVILLTTYQEPALLLEAYKAGADAYLSKELSAPELKRRLLRIRQGE
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCC
ERLTAPDIPALTPREEEVLRLLAEGLSTKEIARALRLSPETVRSHLESLYAKLEARNRVE
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALSRARSLGFLP
HHHHHHHCCCCC
>Mature Secondary Structure
MRLLVADDHPLFRLGLKAALEAEGLEVVAEAGTGEEALVQALEKAPDAVLLDLRMPGMDG
CEEEEECCCCHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCH
LTCARRLREMGYRGLVILLTTYQEPALLLEAYKAGADAYLSKELSAPELKRRLLRIRQGE
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCC
ERLTAPDIPALTPREEEVLRLLAEGLSTKEIARALRLSPETVRSHLESLYAKLEARNRVE
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALSRARSLGFLP
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]