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The map label for this gene is 55980970

Identifier: 55980970

GI number: 55980970

Start: 947665

End: 948171

Strand: Reverse

Name: 55980970

Synonym: TTHA1001

Alternate gene names: NA

Gene position: 948171-947665 (Counterclockwise)

Preceding gene: 55980982

Following gene: 55980969

Centisome position: 51.26

GC content: 73.96

Gene sequence:

>507_bases
TTGGGAAGCTTCCTGGAGGTGCAGCTCCTCGCCCCTCCCTGGCGGGCCCGGAGGGCCTTCGGGGCGGTGCTGCGGGAGGT
GAGGCGGTTGGAGGCGGTCTTCAGCCGCCACCGGGAAAGCGAGCTCACCCGCCTGGTGCGCCAGGGGGGCGGGAGGCCGA
GCCCAGAGATGCGGGAGGTCCTCGCCGCGGCCTTGGCGCTGAAGGAGGCCACGGGCGGGGCCTTCCACCCGGCGCCCGCC
CACGGCGGGGAGGCCTTCCGCTTCGTGGGCGAGGAGGTGGAGGTCCTGGCGCCCCTGGACCTGGACGGCCTGGCCAAGGG
GTACATCGCCGACAAAGGGGCGGAGGCCGCCCTGAGGGCAGGGGCGAGGGCCGCCTTGGTGAACCTGGGAGGAGACCTCG
CCCGCAGGGGCCCTGGGCGGGCCGAGGTCCTGGTGGAAGCCCCCTCTACCTCTCCCTCCTCGCCTTCCTCACCCTCCTCT
TCTTCGCCGTCACCGGCCTCACCCTGA

Upstream 100 bases:

>100_bases
CCATGCTGCGAAACCCAGGTGCGGGCGCCTAACGGCCGTCTAACCGGACTGCCCTACCCTCCCTTCCATGGGCCGGTACG
GGGCCAGGTGAGAAGGGGTT

Downstream 100 bases:

>100_bases
ACCACCCGGAGTGGTTCGGGGAAGGAGCCCCGAGGAAGCTCTCCGGGACCCTCCCCGGGGCCCCTTACCTCGAGGGCGGG
TCCGTGGACTGGCTCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGSFLEVQLLAPPWRARRAFGAVLREVRRLEAVFSRHRESELTRLVRQGGGRPSPEMREVLAAALALKEATGGAFHPAPA
HGGEAFRFVGEEVEVLAPLDLDGLAKGYIADKGAEAALRAGARAALVNLGGDLARRGPGRAEVLVEAPSTSPSSPSSPSS
SSPSPASP

Sequences:

>Translated_168_residues
MGSFLEVQLLAPPWRARRAFGAVLREVRRLEAVFSRHRESELTRLVRQGGGRPSPEMREVLAAALALKEATGGAFHPAPA
HGGEAFRFVGEEVEVLAPLDLDGLAKGYIADKGAEAALRAGARAALVNLGGDLARRGPGRAEVLVEAPSTSPSSPSSPSS
SSPSPASP
>Mature_167_residues
GSFLEVQLLAPPWRARRAFGAVLREVRRLEAVFSRHRESELTRLVRQGGGRPSPEMREVLAAALALKEATGGAFHPAPAH
GGEAFRFVGEEVEVLAPLDLDGLAKGYIADKGAEAALRAGARAALVNLGGDLARRGPGRAEVLVEAPSTSPSSPSSPSSS
SPSPASP

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17511; Mature: 17380

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSFLEVQLLAPPWRARRAFGAVLREVRRLEAVFSRHRESELTRLVRQGGGRPSPEMREV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LAAALALKEATGGAFHPAPAHGGEAFRFVGEEVEVLAPLDLDGLAKGYIADKGAEAALRA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHCHHCCCCHHHHHHH
GARAALVNLGGDLARRGPGRAEVLVEAPSTSPSSPSSPSSSSPSPASP
CCHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSFLEVQLLAPPWRARRAFGAVLREVRRLEAVFSRHRESELTRLVRQGGGRPSPEMREV
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LAAALALKEATGGAFHPAPAHGGEAFRFVGEEVEVLAPLDLDGLAKGYIADKGAEAALRA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHCHHCCCCHHHHHHH
GARAALVNLGGDLARRGPGRAEVLVEAPSTSPSSPSSPSSSSPSPASP
CCHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA