Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980962

Identifier: 55980962

GI number: 55980962

Start: 937895

End: 938902

Strand: Direct

Name: 55980962

Synonym: TTHA0993

Alternate gene names: NA

Gene position: 937895-938902 (Clockwise)

Preceding gene: 55980960

Following gene: 55980963

Centisome position: 50.7

GC content: 73.12

Gene sequence:

>1008_bases
ATGCGCCTATTATGGAGGGAAATGCGCCCCTTCCGGACCGCCTGGCTCGCCCTCCTCCTCGCGGCCTGCGCCCCCGCCCT
CCTCGCCGTGGACCCGGGCCGCCTCCCCGAGCCCGAGGACTGGGACCCCAAGCCCGCCCAGCTGGAGTGGTGGTACGCCT
CGGGGTGGGTGGAGCCCTACGCCTTCCACTTCGCCTTCTTCAAGGCCTACGCCCCGCCCTCCTACCGCATCCTGGGCCTC
CCCGGGAGCCTCTTCGGGCCCTTCCACGCCGCCCACCTCGCCCTCACCGACCTCCGCACCGGGAAGCGGCGCTTTCTGGA
GGTGGCGGACCAGGACCTCTTCGCCAAGAGGGGCGAGGCCCTGCCCGGCCCGCGGCTGGCCCTCATGGGGTGGCGGTTTT
ACCGGGAGGGGGAGGGGTTCCGCCTCGAGGCGCCGGGCGTGGACCTCCGCTTCCGTCCCCTGAAGCCTCCCGTGGTCCAC
CCCCCCTCGGGCACCGCGGAGACGGGGCGGATGCACTACCAGTCCTACACCAGGGTCGCCGCCTGGGGGGAGGTCCTGGG
GGAGGAGGCGCGGGGGGAGGCCTGGCTGGACCACCAGTGGGGGGAACAGCTCTCCGGGCTTGCCGCCACCTGGGACTGGT
TCGGCCTCCACCTCTCCGACGGCTCCGAGCTCATGGCCTACCGGGTCAAGGCGCCCTCGGGACGGGTGGTCCAGGTCCTG
GCGAGCCGGGTGGACCCCCTGGGCAACAGGGAGGACCTCGCCCTGGACTTCCTTCCCTTGGAGACCTGGACGAGCCCCTC
GGGCCGCGCCTACACCCTGGTCTGGCGCCTGGAAGGGCCGGAACTCACCTTGGTCCTGAGGCCCCTCTTCCGCGAGGGGG
AGATCCTCTCCCGCACCACCCGGGTGGCCTACTGGGAAGGGCCCGTGGCGGGGGAGGGCCGCTTCAGGGGCTACCGCGTC
CGCGCCCGCGGCATGGGCGAGTTCGTGGCCGGGGCCTTCCGGCCGTAA

Upstream 100 bases:

>100_bases
CGAGCCGCCTAAGGACCCGGTGAAGGTAAGGGGGCTTTCCCCCTCCAGGACCAAGTCCACCAGGCTTTCCCCCACGAGGG
CGATAGCGGGCTTCTCCACC

Downstream 100 bases:

>100_bases
GGTTTTTTACACGGTTTTCACATCCTCCCCCTACCTTGGAAGCAGAAAGGAGGTGGGTTGAAGTGGCCCTCTTCGGCAGT
CTGGACTCCATGCCCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Hydrolase; Hydroxyneurosporene Synthase; Secreted Hydrolase-Like; ABC-Type Transport System Hydrolase Component; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRLLWREMRPFRTAWLALLLAACAPALLAVDPGRLPEPEDWDPKPAQLEWWYASGWVEPYAFHFAFFKAYAPPSYRILGL
PGSLFGPFHAAHLALTDLRTGKRRFLEVADQDLFAKRGEALPGPRLALMGWRFYREGEGFRLEAPGVDLRFRPLKPPVVH
PPSGTAETGRMHYQSYTRVAAWGEVLGEEARGEAWLDHQWGEQLSGLAATWDWFGLHLSDGSELMAYRVKAPSGRVVQVL
ASRVDPLGNREDLALDFLPLETWTSPSGRAYTLVWRLEGPELTLVLRPLFREGEILSRTTRVAYWEGPVAGEGRFRGYRV
RARGMGEFVAGAFRP

Sequences:

>Translated_335_residues
MRLLWREMRPFRTAWLALLLAACAPALLAVDPGRLPEPEDWDPKPAQLEWWYASGWVEPYAFHFAFFKAYAPPSYRILGL
PGSLFGPFHAAHLALTDLRTGKRRFLEVADQDLFAKRGEALPGPRLALMGWRFYREGEGFRLEAPGVDLRFRPLKPPVVH
PPSGTAETGRMHYQSYTRVAAWGEVLGEEARGEAWLDHQWGEQLSGLAATWDWFGLHLSDGSELMAYRVKAPSGRVVQVL
ASRVDPLGNREDLALDFLPLETWTSPSGRAYTLVWRLEGPELTLVLRPLFREGEILSRTTRVAYWEGPVAGEGRFRGYRV
RARGMGEFVAGAFRP
>Mature_335_residues
MRLLWREMRPFRTAWLALLLAACAPALLAVDPGRLPEPEDWDPKPAQLEWWYASGWVEPYAFHFAFFKAYAPPSYRILGL
PGSLFGPFHAAHLALTDLRTGKRRFLEVADQDLFAKRGEALPGPRLALMGWRFYREGEGFRLEAPGVDLRFRPLKPPVVH
PPSGTAETGRMHYQSYTRVAAWGEVLGEEARGEAWLDHQWGEQLSGLAATWDWFGLHLSDGSELMAYRVKAPSGRVVQVL
ASRVDPLGNREDLALDFLPLETWTSPSGRAYTLVWRLEGPELTLVLRPLFREGEILSRTTRVAYWEGPVAGEGRFRGYRV
RARGMGEFVAGAFRP

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37916; Mature: 37916

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLWREMRPFRTAWLALLLAACAPALLAVDPGRLPEPEDWDPKPAQLEWWYASGWVEPY
CCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHH
AFHFAFFKAYAPPSYRILGLPGSLFGPFHAAHLALTDLRTGKRRFLEVADQDLFAKRGEA
HHHHHHHHHCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPGPRLALMGWRFYREGEGFRLEAPGVDLRFRPLKPPVVHPPSGTAETGRMHYQSYTRVA
CCCCCEEEEEEEEEECCCCEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHH
AWGEVLGEEARGEAWLDHQWGEQLSGLAATWDWFGLHLSDGSELMAYRVKAPSGRVVQVL
HHHHHHHHHHCCCEECCHHHHHHHCCCEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHH
ASRVDPLGNREDLALDFLPLETWTSPSGRAYTLVWRLEGPELTLVLRPLFREGEILSRTT
HHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECHHCCCCHHHHEE
RVAYWEGPVAGEGRFRGYRVRARGMGEFVAGAFRP
EEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCC
>Mature Secondary Structure
MRLLWREMRPFRTAWLALLLAACAPALLAVDPGRLPEPEDWDPKPAQLEWWYASGWVEPY
CCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHH
AFHFAFFKAYAPPSYRILGLPGSLFGPFHAAHLALTDLRTGKRRFLEVADQDLFAKRGEA
HHHHHHHHHCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPGPRLALMGWRFYREGEGFRLEAPGVDLRFRPLKPPVVHPPSGTAETGRMHYQSYTRVA
CCCCCEEEEEEEEEECCCCEEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHH
AWGEVLGEEARGEAWLDHQWGEQLSGLAATWDWFGLHLSDGSELMAYRVKAPSGRVVQVL
HHHHHHHHHHCCCEECCHHHHHHHCCCEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHH
ASRVDPLGNREDLALDFLPLETWTSPSGRAYTLVWRLEGPELTLVLRPLFREGEILSRTT
HHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECHHCCCCHHHHEE
RVAYWEGPVAGEGRFRGYRVRARGMGEFVAGAFRP
EEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA