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The map label for this gene is ytfH [C]

Identifier: 55980950

GI number: 55980950

Start: 925048

End: 925371

Strand: Direct

Name: ytfH [C]

Synonym: TTHA0981

Alternate gene names: 55980950

Gene position: 925048-925371 (Clockwise)

Preceding gene: 55980936

Following gene: 55980955

Centisome position: 50.01

GC content: 71.6

Gene sequence:

>324_bases
ATGGCCGAGGCCTTCTGCCCCGTCTACGCGGCCCTGAACCTCCTCCAGGAGAAGTGGACCCTGCACATCATCCGGGCCCT
CCTGGAGGGGCCCAAGGGGTTCAACGAGCTTTCCCGGGCCGTGGGGGGCGTGAACCCCGCCACCCTCTCCCAGCGCCTGG
ACCAGCTGGTCCGCCTGGGGGTGGTGGAGAAGCGGGTGGAGTCCTACATGCCGCCCCGCACCCGCTACAGCCTCACCCCG
GCGGGCGAGGAGCTGGAGGAGGTGGTCCAGGCCATAGAGCGCTGGGCCAGGCGGCACCTCAAGGCCCCGGACCCGGCCCG
GTAG

Upstream 100 bases:

>100_bases
TCCTTCGTTTCCATGTTTCCACACCCCGGGGCCCCGGCGCAAGGCCGCTCCCTTTCGCTTTACCGGGCAAAGCGCTTACC
CCCTGTGGTACCATGGGGGT

Downstream 100 bases:

>100_bases
GCTACTCGGAAAACTCCCCGGCGAGGTACTGCAGGTAGGCCGGGAGGCCCATGCGGCTGAGGAGCTCCCGCTGCGTCTCC
AGCCAGTCCACGTGGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAEAFCPVYAALNLLQEKWTLHIIRALLEGPKGFNELSRAVGGVNPATLSQRLDQLVRLGVVEKRVESYMPPRTRYSLTP
AGEELEEVVQAIERWARRHLKAPDPAR

Sequences:

>Translated_107_residues
MAEAFCPVYAALNLLQEKWTLHIIRALLEGPKGFNELSRAVGGVNPATLSQRLDQLVRLGVVEKRVESYMPPRTRYSLTP
AGEELEEVVQAIERWARRHLKAPDPAR
>Mature_106_residues
AEAFCPVYAALNLLQEKWTLHIIRALLEGPKGFNELSRAVGGVNPATLSQRLDQLVRLGVVEKRVESYMPPRTRYSLTPA
GEELEEVVQAIERWARRHLKAPDPAR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=95, Percent_Identity=35.7894736842105, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12091; Mature: 11960

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAFCPVYAALNLLQEKWTLHIIRALLEGPKGFNELSRAVGGVNPATLSQRLDQLVRLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
VVEKRVESYMPPRTRYSLTPAGEELEEVVQAIERWARRHLKAPDPAR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AEAFCPVYAALNLLQEKWTLHIIRALLEGPKGFNELSRAVGGVNPATLSQRLDQLVRLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
VVEKRVESYMPPRTRYSLTPAGEELEEVVQAIERWARRHLKAPDPAR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]