| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is paaA [H]
Identifier: 55980941
GI number: 55980941
Start: 915816
End: 916787
Strand: Reverse
Name: paaA [H]
Synonym: TTHA0972
Alternate gene names: 55980941
Gene position: 916787-915816 (Counterclockwise)
Preceding gene: 55980942
Following gene: 55980940
Centisome position: 49.56
GC content: 67.49
Gene sequence:
>972_bases ATGGTGAAGCTTAGGATCGGCTACCCCGAGGACCCCGACTACCAGGAAAGGCTAGAAGAGTTTGAGGCCCGGATCGCCCG CGGGGAGAAGATTGAGCCCGGGGACTGGATGCCCGCGGAGTACCGGAGGCAGCTCATCCGCATGATCTCCCAGCACGCCC ACAGCGAGTGGGTGGGCATGCTCCCCGAGGGCGCCTGGATCACCCGGGCCCCCTCCCTGAGGCGCAAGCTCATCCTCCTG GCCAAGGTCCAGGACGAGGCGGGGCACGGCCAGTACCTCTACCACGCCGCCGAGACCCTGGGGATCACCCGGGAGGAGAT GGTGGAGGCCCTGCTCTCGGGGAAGGCCAAGTACTCCAACATCTTCAACTACCCCACCCTCACCTGGGCGGACGTGGCCA TCATCGGCTGGCTGGTGGACGGCATGGCCATCAAGAACCAGACCATGCTGGCCCAGTGCTCCTACGGCCCCTACTCCCGG GCCATGGTGCGCATCTGCGCCGAGGAGACCTTCCACCACAAGCAGGGGAAGGAGGCGGTCCTCCTCTACGCCAAAGGCTC CCCGAAGCAAAGGCGGATGGTCCAGGACGCCCTGAACCGCTGGTGGTGGCCCACCCTGATGATGGCCGGCCCCCACGACA CCGACTCCCCCCACACCCCCCTCCTCCTCCGCTGGGGCATCAAGACCAAGACCAACGACCAGATCCGCCAGGAGTTCCTG AACGAGCACGTCCCCGAGCTCCTGGATGCGGGGCTTAGCATCCCCGACCCCGACCTCCGCTACGACGAGAAGACCGGGAA CTGGATCCACGGCCCCATCCCTTGGGACGAGTTCTGGAAGGTGATCGGGGGGGAAGGCCCCATGAACCGGCACCGCCTCG AGGCCCGGCGGAGGGCCCACGAGGAGGGGCGCTGGGTGCGGGAGGCCATGGAGGCCTACGCCAAGAGGCGGCTCGCCCAG GCGGCGGACTAG
Upstream 100 bases:
>100_bases TCCCTGGAAGCGCTCGCAGAGGCCTACGCCGAGCTGGTCCTCAAGGCCCTTGGCGTGGCGGCTTCCCCGGAAGGGGAACG CCGTGAGGAAGGAGGCGAAG
Downstream 100 bases:
>100_bases GGAGGAGCCATGTGGGGGACGGAGTGGCCCCGGTTTGAGGTGATCAAGCAGGACACGGAAAGGAGCCTGCCCCAGATGGT GGGCTCGGTGCACGCCACGG
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ AAD
Sequences:
>Translated_323_residues MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ AAD >Mature_323_residues MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ AAD
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=302, Percent_Identity=59.271523178808, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 37446; Mature: 37446
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGM CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC LPEGAWITRAPSLRRKLILLAKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSN CCCCCEEECCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH IFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSRAMVRICAEETFHHKQGKEAV HCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE LLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL EEEECCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHH NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAH HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH EEGRWVREAMEAYAKRRLAQAAD HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGM CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC LPEGAWITRAPSLRRKLILLAKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSN CCCCCEEECCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH IFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSRAMVRICAEETFHHKQGKEAV HCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE LLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL EEEECCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHH NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAH HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH EEGRWVREAMEAYAKRRLAQAAD HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]