Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is paaA [H]

Identifier: 55980941

GI number: 55980941

Start: 915816

End: 916787

Strand: Reverse

Name: paaA [H]

Synonym: TTHA0972

Alternate gene names: 55980941

Gene position: 916787-915816 (Counterclockwise)

Preceding gene: 55980942

Following gene: 55980940

Centisome position: 49.56

GC content: 67.49

Gene sequence:

>972_bases
ATGGTGAAGCTTAGGATCGGCTACCCCGAGGACCCCGACTACCAGGAAAGGCTAGAAGAGTTTGAGGCCCGGATCGCCCG
CGGGGAGAAGATTGAGCCCGGGGACTGGATGCCCGCGGAGTACCGGAGGCAGCTCATCCGCATGATCTCCCAGCACGCCC
ACAGCGAGTGGGTGGGCATGCTCCCCGAGGGCGCCTGGATCACCCGGGCCCCCTCCCTGAGGCGCAAGCTCATCCTCCTG
GCCAAGGTCCAGGACGAGGCGGGGCACGGCCAGTACCTCTACCACGCCGCCGAGACCCTGGGGATCACCCGGGAGGAGAT
GGTGGAGGCCCTGCTCTCGGGGAAGGCCAAGTACTCCAACATCTTCAACTACCCCACCCTCACCTGGGCGGACGTGGCCA
TCATCGGCTGGCTGGTGGACGGCATGGCCATCAAGAACCAGACCATGCTGGCCCAGTGCTCCTACGGCCCCTACTCCCGG
GCCATGGTGCGCATCTGCGCCGAGGAGACCTTCCACCACAAGCAGGGGAAGGAGGCGGTCCTCCTCTACGCCAAAGGCTC
CCCGAAGCAAAGGCGGATGGTCCAGGACGCCCTGAACCGCTGGTGGTGGCCCACCCTGATGATGGCCGGCCCCCACGACA
CCGACTCCCCCCACACCCCCCTCCTCCTCCGCTGGGGCATCAAGACCAAGACCAACGACCAGATCCGCCAGGAGTTCCTG
AACGAGCACGTCCCCGAGCTCCTGGATGCGGGGCTTAGCATCCCCGACCCCGACCTCCGCTACGACGAGAAGACCGGGAA
CTGGATCCACGGCCCCATCCCTTGGGACGAGTTCTGGAAGGTGATCGGGGGGGAAGGCCCCATGAACCGGCACCGCCTCG
AGGCCCGGCGGAGGGCCCACGAGGAGGGGCGCTGGGTGCGGGAGGCCATGGAGGCCTACGCCAAGAGGCGGCTCGCCCAG
GCGGCGGACTAG

Upstream 100 bases:

>100_bases
TCCCTGGAAGCGCTCGCAGAGGCCTACGCCGAGCTGGTCCTCAAGGCCCTTGGCGTGGCGGCTTCCCCGGAAGGGGAACG
CCGTGAGGAAGGAGGCGAAG

Downstream 100 bases:

>100_bases
GGAGGAGCCATGTGGGGGACGGAGTGGCCCCGGTTTGAGGTGATCAAGCAGGACACGGAAAGGAGCCTGCCCCAGATGGT
GGGCTCGGTGCACGCCACGG

Product: phenylacetate-CoA oxygenase subunit PaaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL
AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR
AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL
NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ
AAD

Sequences:

>Translated_323_residues
MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL
AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR
AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL
NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ
AAD
>Mature_323_residues
MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGMLPEGAWITRAPSLRRKLILL
AKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSNIFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSR
AMVRICAEETFHHKQGKEAVLLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL
NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAHEEGRWVREAMEAYAKRRLAQ
AAD

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG3396

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787654, Length=302, Percent_Identity=59.271523178808, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011881
- InterPro:   IPR007814 [H]

Pfam domain/function: PF05138 PaaA_PaaC [H]

EC number: NA

Molecular weight: Translated: 37446; Mature: 37446

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGM
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPEGAWITRAPSLRRKLILLAKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSN
CCCCCEEECCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
IFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSRAMVRICAEETFHHKQGKEAV
HCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE
LLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL
EEEECCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAH
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
EEGRWVREAMEAYAKRRLAQAAD
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLRIGYPEDPDYQERLEEFEARIARGEKIEPGDWMPAEYRRQLIRMISQHAHSEWVGM
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPEGAWITRAPSLRRKLILLAKVQDEAGHGQYLYHAAETLGITREEMVEALLSGKAKYSN
CCCCCEEECCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
IFNYPTLTWADVAIIGWLVDGMAIKNQTMLAQCSYGPYSRAMVRICAEETFHHKQGKEAV
HCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE
LLYAKGSPKQRRMVQDALNRWWWPTLMMAGPHDTDSPHTPLLLRWGIKTKTNDQIRQEFL
EEEECCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
NEHVPELLDAGLSIPDPDLRYDEKTGNWIHGPIPWDEFWKVIGGEGPMNRHRLEARRRAH
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
EEGRWVREAMEAYAKRRLAQAAD
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]