| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980914
Identifier: 55980914
GI number: 55980914
Start: 892725
End: 893096
Strand: Reverse
Name: 55980914
Synonym: TTHA0945
Alternate gene names: NA
Gene position: 893096-892725 (Counterclockwise)
Preceding gene: 55980916
Following gene: 55980913
Centisome position: 48.28
GC content: 70.97
Gene sequence:
>372_bases GTGGCCCTGGATTTCCCGGCAAGCCCCCTGGCTCCTGTCCTCCGCCTCCTGGAGGAGGGCAGGGACCGGGAGGCGGAAGC CCTCCTCCAAACTCCCCAAGAAGGCCTCCCAGAGGCCGAGCGCCTGGGGGAGGACCTGGAGGTCTGGGAGGCCCTCTTGG AGAGGCTACCCTCCCAGGATCCCCGCCGCCCCATCGCCCGGGCCCGGGTGGCAAGGCTCAGGGGGGAGTGGGGCCTTAGA GCCCCGGCCCCGGAGGCAGGCAGCAGGGGACGAAGCACTGGGGAAGGACCCCAGAGCCCCCGAGGAGGTCAAGGAGAAGC CACAAGAGCCGCACGCCTGAAGGCTACCCCGGCCCACGTAACCTCCGCGTAA
Upstream 100 bases:
>100_bases CGCCATGGCGACAACCGCGGCATCGGCGAAGCCCAAGGGCAGGTCCCGGTACCGGGCCAAGGAACAAAAGCCCAGGCCCC CGCACGTCTAAAATGGCTCC
Downstream 100 bases:
>100_bases CGCCCTAGCGTCTTTATGAGAGCTTCCTGAGTTACGCGGGCGTTACCTTCCTCTTGCTACCCTGAGGCTAACCCGTAAGG GGGTGAAGGAGATGCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MALDFPASPLAPVLRLLEEGRDREAEALLQTPQEGLPEAERLGEDLEVWEALLERLPSQDPRRPIARARVARLRGEWGLR APAPEAGSRGRSTGEGPQSPRGGQGEATRAARLKATPAHVTSA
Sequences:
>Translated_123_residues MALDFPASPLAPVLRLLEEGRDREAEALLQTPQEGLPEAERLGEDLEVWEALLERLPSQDPRRPIARARVARLRGEWGLR APAPEAGSRGRSTGEGPQSPRGGQGEATRAARLKATPAHVTSA >Mature_122_residues ALDFPASPLAPVLRLLEEGRDREAEALLQTPQEGLPEAERLGEDLEVWEALLERLPSQDPRRPIARARVARLRGEWGLRA PAPEAGSRGRSTGEGPQSPRGGQGEATRAARLKATPAHVTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13273; Mature: 13142
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDFPASPLAPVLRLLEEGRDREAEALLQTPQEGLPEAERLGEDLEVWEALLERLPSQD CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCC PRRPIARARVARLRGEWGLRAPAPEAGSRGRSTGEGPQSPRGGQGEATRAARLKATPAHV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TSA CCC >Mature Secondary Structure ALDFPASPLAPVLRLLEEGRDREAEALLQTPQEGLPEAERLGEDLEVWEALLERLPSQD CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCC PRRPIARARVARLRGEWGLRAPAPEAGSRGRSTGEGPQSPRGGQGEATRAARLKATPAHV CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TSA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA