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The map label for this gene is tapC [H]

Identifier: 55980763

GI number: 55980763

Start: 759366

End: 760586

Strand: Direct

Name: tapC [H]

Synonym: TTHA0794

Alternate gene names: 55980763

Gene position: 759366-760586 (Clockwise)

Preceding gene: 55980760

Following gene: 55980765

Centisome position: 41.05

GC content: 66.58

Gene sequence:

>1221_bases
ATGCCGGTCTACCAGTATAAGGCCCGGGACCGCCAGGGCCGTCTGGTGGAGGCCACCATTGAGGCCGAGGACCTCCGCAC
CGCCGCGAGGCTCCTCCGCGACCGGGGCCTCTTCGTGGCCGAGATCAAGGAGCCGGGGAAGGGCCTGCAGGCGGAGGTCC
GGATCCCCGCCTTGGAGCGGGGGCCGGGCCTGAAGGACCTCGCCATCTTCTCCCGGCAGCTCGCCACCATGCTGGGGGCG
GGCCTCACCCTCCTCCAGGCCCTCGCCATCCTGGAGCGCCAGACGGAAAACCGGAAGTTCCGGGAGATCCTCAAGCAGGT
GCGCACCGACGTGGAGGGGGGGATGGCCTTCTCCGAGGCCCTCTCCAAGCACAAGATCTTCTCCCGCCTCTACGTGAACC
TGGTGCGGGCGGGGGAGACCTCGGGCGGCCTGGACCTCATCCTGGACCGCTTGGCGAGCTTTCTGGAGAAGGAGCTGGAG
CTAAGGGGCAAGATCCGGAGCGCCATGACCTACCCGGTCATCGTCTTCGTCTTCGCCGTGGGCGTGGCCTACTTCCTCCT
CACGGGGATCGTGCCCCAGTTCGCCCAGATCCTCACGGATTTAGGCTCCGAGCTTCCCCTCCTCACCCGCTTCCTCATCG
CCGTCTCCGACCTTCTTAGGGCGGCCACCCTGCCCCTCCTCCTCCTCGCCGTGGCCCTCTTCTTCGCCTACCGCTGGTAT
TACGGCACCCCCCAGGGGCGTAGGGTCATTGACCGCCTTAAGCTCCGCCTCCCCGTCTTCGGCAACCTCAACCGCAAGAC
CGCCGTGGCCCGCTTCTCCCGCACCCTGGCCCTCCTTCTCTCCAGCGGGGTGAACATCGTGGAGGCCCTGGACATCACCA
AGGGGACCGCGGGCAACAGCGTGGTGGAGGAGATCGTGGAGGCCGCCAAGCTGAAGATCCAGCAGGGCGACCCCTTGAAC
CTCACCCTGGCCCAGCACCCCTTCGTCTTCCCGCCCATGGTGAGCTCCATGGTGGCCATCGGCGAGGAGACGGGGGCCCT
GGACACCATGCTCTCCAAGGTGGCCGACTTCTATGAGCGGGAGGTGGACGAGGCGGTGGCGAGCCTCACCGCGGCCATTG
AGCCCCTCATGATCATCTTCCTGGGCGTCATCGTGGGCATGATCGTGGCCGGGATGTTCCTGCCCCTCTTCAAGATCATC
GGGACCCTCTCCGTACAATAA

Upstream 100 bases:

>100_bases
GGCCAGCACCCCCCAGACCGTGTCCGTGGGGAAGGCCACCAAACCCCCTCCCTTGAGGGTCTCCGCCGCTTTGGCCAGGG
CTTCCTGGTATACTCTTTCC

Downstream 100 bases:

>100_bases
GGGCTTCCGCCACCTCCGGGGGAACCGGCATCACGGAAAGCCGGTTTCCCCTTTTTACGAGGGGGTGGTCCGGGGGGAAG
AGGGCCTTGAGCTCGGCGAG

Product: pilus assembly protein PilC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALERGPGLKDLAIFSRQLATMLGA
GLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEALSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELE
LRGKIRSAMTYPVIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWY
YGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNSVVEEIVEAAKLKIQQGDPLN
LTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKII
GTLSVQ

Sequences:

>Translated_406_residues
MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALERGPGLKDLAIFSRQLATMLGA
GLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEALSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELE
LRGKIRSAMTYPVIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWY
YGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNSVVEEIVEAAKLKIQQGDPLN
LTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKII
GTLSVQ
>Mature_405_residues
PVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALERGPGLKDLAIFSRQLATMLGAG
LTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEALSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELEL
RGKIRSAMTYPVIVFVFAVGVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWYY
GTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNSVVEEIVEAAKLKIQQGDPLNL
TLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYEREVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKIIG
TLSVQ

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=398, Percent_Identity=32.9145728643216, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1786295, Length=334, Percent_Identity=30.5389221556886, Blast_Score=151, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44688; Mature: 44557

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALER
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCC
GPGLKDLAIFSRQLATMLGAGLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
LSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELELRGKIRSAMTYPVIVFVFAV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNS
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHH
VVEEIVEAAKLKIQQGDPLNLTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYER
HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKIIGTLSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALER
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCC
GPGLKDLAIFSRQLATMLGAGLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
LSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELELRGKIRSAMTYPVIVFVFAV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNS
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHH
VVEEIVEAAKLKIQQGDPLNLTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYER
HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPLFKIIGTLSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]