| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980744
Identifier: 55980744
GI number: 55980744
Start: 743204
End: 743986
Strand: Direct
Name: 55980744
Synonym: TTHA0775
Alternate gene names: NA
Gene position: 743204-743986 (Clockwise)
Preceding gene: 55980743
Following gene: 55980745
Centisome position: 40.18
GC content: 70.88
Gene sequence:
>783_bases ATGAGAAAACTCCTCTCCCTAGCCCTCCTCCTCTCCCTGGCCCAGGCCCAGACCGGGGTGGGGGTAAGCCCTCCCCGGGT GCTCCTGCCCCTGGCCCCGGGGGCCAGCGCCACCCAGACGGTGGTGGTGGACCACCCGGGCCGCCAGGGCACCTTAAGGG TGAGCGTGGTCCTCTCGGATGTCCTCCTGAAGCCCGACGGGGCCCCCCTCTACCTGGACCCGGGAAGCCACCCCCGTAGC CTGGCGCGCTGGCTTTCCGTGACCCCCCTGGAGTTCCTCCTCCAGCCCCAGGCCAGCCAGGAGGTGCGTTACACGGTGCA GGTGCCCCCGGACGCCGAGGCGGGAACCTACTGGGGGATCATCTTTTTTGAGTCGGGTCCGGCCCAGGAACGGCAGGAGG GAGGGGGCATCGGCATCCGGGTGCGCACCCGGGTGGGGCACGTGGTCTACGTGGACGTGGGCCGGGTGGTCCGCTCCGGT CGCATCCAGGGGGTGCGCTACCAGCCCCCTTCGGGCCGGGAGGGCGCGGTCCTTCGCGTGGTCTTCCAGAACACGGGCAA CGGGGTCTTGCGCCTGAAGGGGCGGGTGGAGGTGCGGGACGCCCAGGGGAAGGTGGTGGCCCAGGCCCTCGTACCCGAAA CCGCAAGCCTCCCCGGGGCCACCCACGAGGTCCCCGCTCCCCTGGAAAAGCCCCTTTCCCCCGGGCGCTACGTGGTCCTG GCGGTCTTGGACTACGGGGAAGCGAGCCTCATCGCTGGGGAAGCGCGGTTGGAAGTGCGTTGA
Upstream 100 bases:
>100_bases CACCTACGAGTTCAACTTCCTCTTCCAGCTCGCCGCCCTCTAAGGCCCTCTGCCCCCCCGGGGGCTTTCCCCCGGGGGGT TTTCCCGCTAAACTCCGGCC
Downstream 100 bases:
>100_bases GGAGGTGGACTTTGCCCAGGTGGTTTTGGCTCCTTTGGACGGGGCTCCTGGCCCTGGCCCAGGTTCCCGTGGGGGTGAAC CTCCCGGAGGGAAGCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRKLLSLALLLSLAQAQTGVGVSPPRVLLPLAPGASATQTVVVDHPGRQGTLRVSVVLSDVLLKPDGAPLYLDPGSHPRS LARWLSVTPLEFLLQPQASQEVRYTVQVPPDAEAGTYWGIIFFESGPAQERQEGGGIGIRVRTRVGHVVYVDVGRVVRSG RIQGVRYQPPSGREGAVLRVVFQNTGNGVLRLKGRVEVRDAQGKVVAQALVPETASLPGATHEVPAPLEKPLSPGRYVVL AVLDYGEASLIAGEARLEVR
Sequences:
>Translated_260_residues MRKLLSLALLLSLAQAQTGVGVSPPRVLLPLAPGASATQTVVVDHPGRQGTLRVSVVLSDVLLKPDGAPLYLDPGSHPRS LARWLSVTPLEFLLQPQASQEVRYTVQVPPDAEAGTYWGIIFFESGPAQERQEGGGIGIRVRTRVGHVVYVDVGRVVRSG RIQGVRYQPPSGREGAVLRVVFQNTGNGVLRLKGRVEVRDAQGKVVAQALVPETASLPGATHEVPAPLEKPLSPGRYVVL AVLDYGEASLIAGEARLEVR >Mature_260_residues MRKLLSLALLLSLAQAQTGVGVSPPRVLLPLAPGASATQTVVVDHPGRQGTLRVSVVLSDVLLKPDGAPLYLDPGSHPRS LARWLSVTPLEFLLQPQASQEVRYTVQVPPDAEAGTYWGIIFFESGPAQERQEGGGIGIRVRTRVGHVVYVDVGRVVRSG RIQGVRYQPPSGREGAVLRVVFQNTGNGVLRLKGRVEVRDAQGKVVAQALVPETASLPGATHEVPAPLEKPLSPGRYVVL AVLDYGEASLIAGEARLEVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27755; Mature: 27755
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLSLALLLSLAQAQTGVGVSPPRVLLPLAPGASATQTVVVDHPGRQGTLRVSVVLSD CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEE VLLKPDGAPLYLDPGSHPRSLARWLSVTPLEFLLQPQASQEVRYTVQVPPDAEAGTYWGI HEECCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE IFFESGPAQERQEGGGIGIRVRTRVGHVVYVDVGRVVRSGRIQGVRYQPPSGREGAVLRV EEECCCCCHHHHCCCCEEEEEEEECCEEEEEEHHHHHHCCCCCEEEECCCCCCCCCEEEE VFQNTGNGVLRLKGRVEVRDAQGKVVAQALVPETASLPGATHEVPAPLEKPLSPGRYVVL EEECCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCEEEE AVLDYGEASLIAGEARLEVR EEEECCCCEEEECCEEEEEC >Mature Secondary Structure MRKLLSLALLLSLAQAQTGVGVSPPRVLLPLAPGASATQTVVVDHPGRQGTLRVSVVLSD CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEE VLLKPDGAPLYLDPGSHPRSLARWLSVTPLEFLLQPQASQEVRYTVQVPPDAEAGTYWGI HEECCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE IFFESGPAQERQEGGGIGIRVRTRVGHVVYVDVGRVVRSGRIQGVRYQPPSGREGAVLRV EEECCCCCHHHHCCCCEEEEEEEECCEEEEEEHHHHHHCCCCCEEEECCCCCCCCCEEEE VFQNTGNGVLRLKGRVEVRDAQGKVVAQALVPETASLPGATHEVPAPLEKPLSPGRYVVL EEECCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCEEEE AVLDYGEASLIAGEARLEVR EEEECCCCEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA