| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980725
Identifier: 55980725
GI number: 55980725
Start: 722571
End: 723764
Strand: Direct
Name: 55980725
Synonym: TTHA0756
Alternate gene names: NA
Gene position: 722571-723764 (Clockwise)
Preceding gene: 55980724
Following gene: 55980734
Centisome position: 39.06
GC content: 72.03
Gene sequence:
>1194_bases ATGAAGGCGAAGGGGTTTTTCTTGGGGCTACTCGCCCTCCTGGGCGGGTTCGGCGGGGCGGAGGGGCTTGGGGACCCTAT GGCGGGGAGGCTGGAGCGGGAGGCGGAGGTGCTCCTTCGCCTCTTCACGGAGGAGGTCCGCGAGGAGGCCTTCGCTCCCG GCTTCCTCGCCCAGGTGCCCGCGGCCCAGGTGGCGGCCATCGTGGCCCGGCTGAAGGCCAACCTGGGGGAGCCCGAGGGG GCGCGGCCCCTGGAGCCGGGAAGGTACCTCTTGGAGCTTGAGCGGGGGTATGTGCCCGCCCGCATCAGCTTGGACCGGGA GGGGCGCATCGCGGGCCTCTTCTTTGAGCCCCCCGTGGCCAAGCTGGGAAGCCTCGAGGAGGCCCTGGAGGCCTTCCGGG GCCTTTCGGGGCGGGTGGGGCTGTGGGTGGAGCGGGACGGGAGGCCTGTCTTGGCCCTGGAGGAGGACACGCCTCTGGCC GTGGCCTCGGCCTTCAAGCTTCTGGTCCTCGCCGCCTTGCGCGAGGAGGTGGAGGCGGGGAGGCGGGCGTGGGACGAGGT GGTCCGCCTGGAGGAGGCGTGGAAGAGCCTGCCCTCCGGCTTGCTCCAGGGCTGGCCGGAGGGGAGCCCCTTGACCCTCC ACACCCTGGCGGCCCTCATGATCTCCCTCTCCGACAACACCGCCACGGACGCCCTCATCGCCCTCCTCGGGCGGGAGCGC CTCGAGGCCCTCTCCCCCCGCAACCGCCCCTTCCTCACCACCAGGGAGGCCTTCGGCCTCGCCGCCCGGGGGAACCGGGA CCTCTTGGCGGCCTTCCGCGACGGGGACCTGGAGGCCAAGCGCCGGACCCTGGAGGCCCTGAGGGCCCGGGGCCTGCCCC AGGTAGTGGACCTGCCCCTAGACCCCGGGGACTGGCCGCCCGAGGCGGACTGGCGCTTTACCCCGAGGGAGCTCTGCCGC TGGATGGGGAAGGTGGCGGACCTTCCCCTCATGGGCATCAACCCCGGGGTGGCCGCCTTCGGCTGGGACCGGGTGGCCTA CAAGGGGGGCTCGAGGCCCGGGGTCCTGAGCCTGGTCCACGGCCTTTCCCGCGGCAAAAGCCGCTACTGCGTGGCCTTCG TGTGGAACGGGGAGGAGGTGGACGAGCTCAAGGCCTTCACCCTCTACGGGGGGCTTTTGGACCTTCTTCCCTAA
Upstream 100 bases:
>100_bases CTTCGGGCGGGGGCAGGCGGTCTTCCGTCTCGGGGAGGCCCTCGTGGGGGCGAGCGACCCCCGGGCCGAGGGGCTCGCCT TGGCGTGGTAGTTTGGAGCC
Downstream 100 bases:
>100_bases AGCGGATAGGCGAACCCCAGGAGGCTCTTCGCCCCAAGCCGTTCCTGGAGGTCTTGGGGCAGGGGGGAGAGGCGCGCCTT CTGCAGGGTAAGGTTCGCCT
Product: beta-lactamase
Products: NA
Alternate protein names: Beta Lactamase-Related Protein; Beta-Lactamase Related Protein; Beta-Lactamase-Like Protein; Beta-Lactamase Class A-Like Protein
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKAKGFFLGLLALLGGFGGAEGLGDPMAGRLEREAEVLLRLFTEEVREEAFAPGFLAQVPAAQVAAIVARLKANLGEPEG ARPLEPGRYLLELERGYVPARISLDREGRIAGLFFEPPVAKLGSLEEALEAFRGLSGRVGLWVERDGRPVLALEEDTPLA VASAFKLLVLAALREEVEAGRRAWDEVVRLEEAWKSLPSGLLQGWPEGSPLTLHTLAALMISLSDNTATDALIALLGRER LEALSPRNRPFLTTREAFGLAARGNRDLLAAFRDGDLEAKRRTLEALRARGLPQVVDLPLDPGDWPPEADWRFTPRELCR WMGKVADLPLMGINPGVAAFGWDRVAYKGGSRPGVLSLVHGLSRGKSRYCVAFVWNGEEVDELKAFTLYGGLLDLLP
Sequences:
>Translated_397_residues MKAKGFFLGLLALLGGFGGAEGLGDPMAGRLEREAEVLLRLFTEEVREEAFAPGFLAQVPAAQVAAIVARLKANLGEPEG ARPLEPGRYLLELERGYVPARISLDREGRIAGLFFEPPVAKLGSLEEALEAFRGLSGRVGLWVERDGRPVLALEEDTPLA VASAFKLLVLAALREEVEAGRRAWDEVVRLEEAWKSLPSGLLQGWPEGSPLTLHTLAALMISLSDNTATDALIALLGRER LEALSPRNRPFLTTREAFGLAARGNRDLLAAFRDGDLEAKRRTLEALRARGLPQVVDLPLDPGDWPPEADWRFTPRELCR WMGKVADLPLMGINPGVAAFGWDRVAYKGGSRPGVLSLVHGLSRGKSRYCVAFVWNGEEVDELKAFTLYGGLLDLLP >Mature_397_residues MKAKGFFLGLLALLGGFGGAEGLGDPMAGRLEREAEVLLRLFTEEVREEAFAPGFLAQVPAAQVAAIVARLKANLGEPEG ARPLEPGRYLLELERGYVPARISLDREGRIAGLFFEPPVAKLGSLEEALEAFRGLSGRVGLWVERDGRPVLALEEDTPLA VASAFKLLVLAALREEVEAGRRAWDEVVRLEEAWKSLPSGLLQGWPEGSPLTLHTLAALMISLSDNTATDALIALLGRER LEALSPRNRPFLTTREAFGLAARGNRDLLAAFRDGDLEAKRRTLEALRARGLPQVVDLPLDPGDWPPEADWRFTPRELCR WMGKVADLPLMGINPGVAAFGWDRVAYKGGSRPGVLSLVHGLSRGKSRYCVAFVWNGEEVDELKAFTLYGGLLDLLP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43271; Mature: 43271
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKGFFLGLLALLGGFGGAEGLGDPMAGRLEREAEVLLRLFTEEVREEAFAPGFLAQVP CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC AAQVAAIVARLKANLGEPEGARPLEPGRYLLELERGYVPARISLDREGRIAGLFFEPPVA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCCEEEEECCCCCEEEEEECCCHH KLGSLEEALEAFRGLSGRVGLWVERDGRPVLALEEDTPLAVASAFKLLVLAALREEVEAG HHCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RRAWDEVVRLEEAWKSLPSGLLQGWPEGSPLTLHTLAALMISLSDNTATDALIALLGRER HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LEALSPRNRPFLTTREAFGLAARGNRDLLAAFRDGDLEAKRRTLEALRARGLPQVVDLPL HHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCC DPGDWPPEADWRFTPRELCRWMGKVADLPLMGINPGVAAFGWDRVAYKGGSRPGVLSLVH CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHCCCCHHHCCCCCCCHHHHHHH GLSRGKSRYCVAFVWNGEEVDELKAFTLYGGLLDLLP HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAKGFFLGLLALLGGFGGAEGLGDPMAGRLEREAEVLLRLFTEEVREEAFAPGFLAQVP CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC AAQVAAIVARLKANLGEPEGARPLEPGRYLLELERGYVPARISLDREGRIAGLFFEPPVA HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEHHCCCCCEEEEECCCCCEEEEEECCCHH KLGSLEEALEAFRGLSGRVGLWVERDGRPVLALEEDTPLAVASAFKLLVLAALREEVEAG HHCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH RRAWDEVVRLEEAWKSLPSGLLQGWPEGSPLTLHTLAALMISLSDNTATDALIALLGRER HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LEALSPRNRPFLTTREAFGLAARGNRDLLAAFRDGDLEAKRRTLEALRARGLPQVVDLPL HHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCC DPGDWPPEADWRFTPRELCRWMGKVADLPLMGINPGVAAFGWDRVAYKGGSRPGVLSLVH CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHCCCCHHHCCCCCCCHHHHHHH GLSRGKSRYCVAFVWNGEEVDELKAFTLYGGLLDLLP HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA