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The map label for this gene is yvrC [H]

Identifier: 55980715

GI number: 55980715

Start: 714458

End: 715312

Strand: Direct

Name: yvrC [H]

Synonym: TTHA0746

Alternate gene names: 55980715

Gene position: 714458-715312 (Clockwise)

Preceding gene: 55980708

Following gene: 55980716

Centisome position: 38.62

GC content: 68.3

Gene sequence:

>855_bases
ATGAAAAGACTCCTGGCGGCCCTCTCGGTTCTTCTGGCCTTGGCCTTCGCCTTTCCCCTCACCCTGCAGGACGACCTGGG
GCGCACGGTCACCCTCCAGGCCCCGCCCAAGCGCATCGTCACCATGCTGCCCTCGGTCACGGAGACGGTCTGCGCCCTCG
GGGCCTGCGACCGGATCGTGGCCACGGACGACTACTCCGACTGGCCGGAAAGCGTGAAGAGGCTTCCCAAGGCGGGCGGG
CTCTACAACCCCAACCCCGAGCTCATCGTCTCCCTCAAGCCCGACCTGGTGCTGGTGTCCAAGTACGGGAGGCTCTACGA
GACCCTGGAGCGGGCCGGGCTCACGGTGTACGCGGTCAGGACCGAGACCTACGAGGACATCTTCAAGACGGTGCGCACCC
TGGGGAGGCTTCTCGGCCTCGAGGCCGAGGCCGAGCGGCTCGTGGCCCAGATCCAGAAGGAGGTCTACCAGGAGGAGGCC
CGGGCGGCCAAGGCCAGGTCCCGCCCCCGGGTCTACTACGAGATTGACCCCACCCCCTACACCGTGGGCCCCGAGAGCTT
CATCGGCGTCCTCATAAGTAAGGCCCGGGGGGTGAACATCGTGCCCAAGGAGCTCGGCCTCTTCCCCAAGATCAGCCCCG
AGTTCGTGGTGGAGAAGGACCCCGAGGTCATCGTGGCCACCTACCCGAACGCCCTGGAGACCATCCGCTCCCGCCCCGGC
TGGAGCCGCATCCAGGCGGTGCGCACGGGCCGGATCTGCGTCTACACCGGGGGTGAGGACAGCCTCCTCTCCCGTCCCGG
CCCCCGGGTGGCCCAGGCCCTGAGGCTCCTCGTGGACTGCTTCCACGGGCGATGA

Upstream 100 bases:

>100_bases
AGTGGGGGATAAACGGCGTTTGCCTTTAGCCCCTGCCTCCCGGCAGGGGTTTTTCCCTACCTCCCCCGGGCCTGGCCCTA
GCGGCCTTAGGGAGGTGGGC

Downstream 100 bases:

>100_bases
CCCGCGCCCTGCCCCCCGCCCTCGCCCGGGGCCTCGTCTTCCTCTGGCTTGTGGCCCTCCTCCTCGGGGCCGTGGCCTTA
GGGGTGGGGCTCGGCGCCGT

Product: iron ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKRLLAALSVLLALAFAFPLTLQDDLGRTVTLQAPPKRIVTMLPSVTETVCALGACDRIVATDDYSDWPESVKRLPKAGG
LYNPNPELIVSLKPDLVLVSKYGRLYETLERAGLTVYAVRTETYEDIFKTVRTLGRLLGLEAEAERLVAQIQKEVYQEEA
RAAKARSRPRVYYEIDPTPYTVGPESFIGVLISKARGVNIVPKELGLFPKISPEFVVEKDPEVIVATYPNALETIRSRPG
WSRIQAVRTGRICVYTGGEDSLLSRPGPRVAQALRLLVDCFHGR

Sequences:

>Translated_284_residues
MKRLLAALSVLLALAFAFPLTLQDDLGRTVTLQAPPKRIVTMLPSVTETVCALGACDRIVATDDYSDWPESVKRLPKAGG
LYNPNPELIVSLKPDLVLVSKYGRLYETLERAGLTVYAVRTETYEDIFKTVRTLGRLLGLEAEAERLVAQIQKEVYQEEA
RAAKARSRPRVYYEIDPTPYTVGPESFIGVLISKARGVNIVPKELGLFPKISPEFVVEKDPEVIVATYPNALETIRSRPG
WSRIQAVRTGRICVYTGGEDSLLSRPGPRVAQALRLLVDCFHGR
>Mature_284_residues
MKRLLAALSVLLALAFAFPLTLQDDLGRTVTLQAPPKRIVTMLPSVTETVCALGACDRIVATDDYSDWPESVKRLPKAGG
LYNPNPELIVSLKPDLVLVSKYGRLYETLERAGLTVYAVRTETYEDIFKTVRTLGRLLGLEAEAERLVAQIQKEVYQEEA
RAAKARSRPRVYYEIDPTPYTVGPESFIGVLISKARGVNIVPKELGLFPKISPEFVVEKDPEVIVATYPNALETIRSRPG
WSRIQAVRTGRICVYTGGEDSLLSRPGPRVAQALRLLVDCFHGR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=221, Percent_Identity=29.8642533936652, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 31512; Mature: 31512

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLAALSVLLALAFAFPLTLQDDLGRTVTLQAPPKRIVTMLPSVTETVCALGACDRIV
CHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
ATDDYSDWPESVKRLPKAGGLYNPNPELIVSLKPDLVLVSKYGRLYETLERAGLTVYAVR
ECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCEEEEEE
TETYEDIFKTVRTLGRLLGLEAEAERLVAQIQKEVYQEEARAAKARSRPRVYYEIDPTPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TVGPESFIGVLISKARGVNIVPKELGLFPKISPEFVVEKDPEVIVATYPNALETIRSRPG
CCCHHHHHHHHHHHCCCCEECHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCC
WSRIQAVRTGRICVYTGGEDSLLSRPGPRVAQALRLLVDCFHGR
HHHHHHHHCCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLLAALSVLLALAFAFPLTLQDDLGRTVTLQAPPKRIVTMLPSVTETVCALGACDRIV
CHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
ATDDYSDWPESVKRLPKAGGLYNPNPELIVSLKPDLVLVSKYGRLYETLERAGLTVYAVR
ECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCEEEEEE
TETYEDIFKTVRTLGRLLGLEAEAERLVAQIQKEVYQEEARAAKARSRPRVYYEIDPTPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TVGPESFIGVLISKARGVNIVPKELGLFPKISPEFVVEKDPEVIVATYPNALETIRSRPG
CCCHHHHHHHHHHHCCCCEECHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCC
WSRIQAVRTGRICVYTGGEDSLLSRPGPRVAQALRLLVDCFHGR
HHHHHHHHCCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]