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The map label for this gene is yddE [C]

Identifier: 55980679

GI number: 55980679

Start: 674040

End: 674933

Strand: Reverse

Name: yddE [C]

Synonym: TTHA0710

Alternate gene names: 55980679

Gene position: 674933-674040 (Counterclockwise)

Preceding gene: 55980680

Following gene: 55980678

Centisome position: 36.49

GC content: 74.05

Gene sequence:

>894_bases
ATGAAGCGGATCCCCTACGCCTTGGTGGACGTCTTCGCCCCCGCCCCCGGGGCGGGCAACCGGGTGGCCGTGGTCCTGGA
CGCCCGGGGGATGTCCCCGGAGGAGATGCAGGCGGTGGCCCAAAGCCTGGGGGCGGCCGAGGCCGCCTTCCTCCTGGAGC
GCACCGGCGCGGCCCTCTCCGTCCGCTTCTTCGCCCCGGGGGGGGAGGTGGAGTTCTCCGGGCACGCCGCCGTGGCCGTG
GGCCTCACCGCGGCCCGCACCGGCCTGGTGCCGGAAGGGACGACGCGCCTTTACCTCCACACGCCCACGGAGGTGCTGCC
CGTGGAGCTCGTCTTGGAGGCGGGGGAGCCCCGCAAGGCCTGGGTCCGGGGCCCCGCCCCCCGGTTCCGGGACCTTCCCC
CCTACCGGGCCCTGAGGGAGGTCCTCGAGGCCCTGGGCTCCGACGAGCGCTACCTCCACCGGGGCCTCCCCTACGGGGTG
GCCTTCACCGGGCTTTGGAGCCTCTTCGTGCCCCTCATCGCCCCGGGGGTGGTGGACGCCCTGGAGCCGGAGATGGAACG
GCTCAAGGCGCTTTGCTTCCGGCTGGACGTGGCCACGGTCCACGCCTACGCCCCCATGGGCCCGAGGAGCTTCTACGCCC
GGGACTTCGCCCCCCTCCTCGGCATCCCCGAGGACCCGGTCACGGGCTCCGCCAACGCCGCCCTGGGGGCCCTCCTCGCC
CGGGCCGGGGTGGTGCCGAGGCGGGAGGGAAAGGTCCTCCTCACCGTCTACCAGGGGCACCACCTGGGCAACCCCGGGGT
GGTGGAGGTCCAGGTGGAGTACAGCCCCACGGGCGAGCCCTACAGCGTCCAGATCGGGGGCGAAGCGGTGATCGTCCAGA
CGGGGGAGGTTTGA

Upstream 100 bases:

>100_bases
CCTTCCCCAAGAACAAGGAAGGCAAGGACCCCCTGACCGGCGCCCCGAGCCCCGTGCCCGAGGAGCAGCTTAGGGAGCTC
GGCCTCATGGTGGTCCGGCC

Downstream 100 bases:

>100_bases
GCGCGGGGAAGCCCATGGTCCGCCTGGTCTTCGTGGACGTGGACGGCACCCTGGTGGGCCGGGAGGGGGTGCCCCCCTGC
GTCTGGCCCGAGGTGGAGGC

Product: phenazine biosynthesis protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKRIPYALVDVFAPAPGAGNRVAVVLDARGMSPEEMQAVAQSLGAAEAAFLLERTGAALSVRFFAPGGEVEFSGHAAVAV
GLTAARTGLVPEGTTRLYLHTPTEVLPVELVLEAGEPRKAWVRGPAPRFRDLPPYRALREVLEALGSDERYLHRGLPYGV
AFTGLWSLFVPLIAPGVVDALEPEMERLKALCFRLDVATVHAYAPMGPRSFYARDFAPLLGIPEDPVTGSANAALGALLA
RAGVVPRREGKVLLTVYQGHHLGNPGVVEVQVEYSPTGEPYSVQIGGEAVIVQTGEV

Sequences:

>Translated_297_residues
MKRIPYALVDVFAPAPGAGNRVAVVLDARGMSPEEMQAVAQSLGAAEAAFLLERTGAALSVRFFAPGGEVEFSGHAAVAV
GLTAARTGLVPEGTTRLYLHTPTEVLPVELVLEAGEPRKAWVRGPAPRFRDLPPYRALREVLEALGSDERYLHRGLPYGV
AFTGLWSLFVPLIAPGVVDALEPEMERLKALCFRLDVATVHAYAPMGPRSFYARDFAPLLGIPEDPVTGSANAALGALLA
RAGVVPRREGKVLLTVYQGHHLGNPGVVEVQVEYSPTGEPYSVQIGGEAVIVQTGEV
>Mature_297_residues
MKRIPYALVDVFAPAPGAGNRVAVVLDARGMSPEEMQAVAQSLGAAEAAFLLERTGAALSVRFFAPGGEVEFSGHAAVAV
GLTAARTGLVPEGTTRLYLHTPTEVLPVELVLEAGEPRKAWVRGPAPRFRDLPPYRALREVLEALGSDERYLHRGLPYGV
AFTGLWSLFVPLIAPGVVDALEPEMERLKALCFRLDVATVHAYAPMGPRSFYARDFAPLLGIPEDPVTGSANAALGALLA
RAGVVPRREGKVLLTVYQGHHLGNPGVVEVQVEYSPTGEPYSVQIGGEAVIVQTGEV

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=291, Percent_Identity=32.3024054982818, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 31579; Mature: 31579

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIPYALVDVFAPAPGAGNRVAVVLDARGMSPEEMQAVAQSLGAAEAAFLLERTGAALS
CCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEE
VRFFAPGGEVEFSGHAAVAVGLTAARTGLVPEGTTRLYLHTPTEVLPVELVLEAGEPRKA
EEEECCCCCEEECCCEEEEEEHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCE
WVRGPAPRFRDLPPYRALREVLEALGSDERYLHRGLPYGVAFTGLWSLFVPLIAPGVVDA
EECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH
LEPEMERLKALCFRLDVATVHAYAPMGPRSFYARDFAPLLGIPEDPVTGSANAALGALLA
CCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RAGVVPRREGKVLLTVYQGHHLGNPGVVEVQVEYSPTGEPYSVQIGGEAVIVQTGEV
HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCEEEEEEECCC
>Mature Secondary Structure
MKRIPYALVDVFAPAPGAGNRVAVVLDARGMSPEEMQAVAQSLGAAEAAFLLERTGAALS
CCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEE
VRFFAPGGEVEFSGHAAVAVGLTAARTGLVPEGTTRLYLHTPTEVLPVELVLEAGEPRKA
EEEECCCCCEEECCCEEEEEEHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCE
WVRGPAPRFRDLPPYRALREVLEALGSDERYLHRGLPYGVAFTGLWSLFVPLIAPGVVDA
EECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH
LEPEMERLKALCFRLDVATVHAYAPMGPRSFYARDFAPLLGIPEDPVTGSANAALGALLA
CCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RAGVVPRREGKVLLTVYQGHHLGNPGVVEVQVEYSPTGEPYSVQIGGEAVIVQTGEV
HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]