Click here to switch to the map view.

The map label for this gene is yjnA [H]

Identifier: 55980637

GI number: 55980637

Start: 634823

End: 635563

Strand: Reverse

Name: yjnA [H]

Synonym: TTHA0668

Alternate gene names: 55980637

Gene position: 635563-634823 (Counterclockwise)

Preceding gene: 55980638

Following gene: 55980636

Centisome position: 34.36

GC content: 71.93

Gene sequence:

>741_bases
ATGGCCTTTCTGCTGGGCTTTCTCATCGCCTTCGCCATCGGGGTCACGGGGGTGGGGGCGGGGACGGTTACGGCGCCCCT
CCTCATCCTCGCCCTGGGGCTTCCCCCGGAGGTGGCCGTGGGCACGGCGCTTCTCTTCGGCTTCCTGGTGAAGGTGCCGG
CGGGAGCCGTCTACCTCTTAAGGCGGCAGGTGGACGCCCGGGCCCTCCTCCGCCTCCTCCTCGGGGGGGTCCCGGGGGTG
CTTCTGGGAAGCCTCCTCCTCACGCAGCTCAAGGGGGCAAAGGACCTGGTCCTCCTCCTCGTGGGCCTCACCGTGGTCCT
CTCGGCGGGGCTTGGGCTTTGGCGGGGCCTGAAGGGGGTCGGACGAGGGAGGGAAAGGCCCTGGCTTCTTCCCCCGGCGG
CCTTCGGCATCGGCCTCGAGGTGGGCTTCTCCTCCGCCGGGGCCGGGGCCCTGGGGACCCTCCTCCTCCTCCACGCCACC
CGGCTTTCCCCCCAGAAGGTGGTGGGCACCGACCTCCTCTTCGGCCTCGTCCTCGCCCTCCTGGGGGGCGGGGTCCACCT
CGCCTTCGGCCAGGTGGCCCCAAGCCTCCTCCTCGCCCTGGCCTCGGGCGGGGTGGCGGGGGGGCTTCTCGGGGCCCTCT
TCGCCACCCGGCTTCCCAAGGAGCCCTTAAGGCTCGCCCTCCTCCTCTGGCTCCTCTTCATCGGGGGGCAGCTCGTCTAC
AGGGGGGTGGTCCATGGGTAG

Upstream 100 bases:

>100_bases
CACGGCGAAGCCCTTGGACCCCTCGGACCCCCGCTCGGGCCGCTGGGCGGGAAAGGGCAAGCTGGAGTGCGGCATCCACC
TGCACGGTAAGGAGGGGTAG

Downstream 100 bases:

>100_bases
GGTCTACCTGGTGGGGGCGGGCCCCGGGGACCCGGAGCTTCTGACCCTCAAGGCCTACCGCCTCCTCAAGGAGGCCCCCG
TGGTCCTCTACGACCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAFLLGFLIAFAIGVTGVGAGTVTAPLLILALGLPPEVAVGTALLFGFLVKVPAGAVYLLRRQVDARALLRLLLGGVPGV
LLGSLLLTQLKGAKDLVLLLVGLTVVLSAGLGLWRGLKGVGRGRERPWLLPPAAFGIGLEVGFSSAGAGALGTLLLLHAT
RLSPQKVVGTDLLFGLVLALLGGGVHLAFGQVAPSLLLALASGGVAGGLLGALFATRLPKEPLRLALLLWLLFIGGQLVY
RGVVHG

Sequences:

>Translated_246_residues
MAFLLGFLIAFAIGVTGVGAGTVTAPLLILALGLPPEVAVGTALLFGFLVKVPAGAVYLLRRQVDARALLRLLLGGVPGV
LLGSLLLTQLKGAKDLVLLLVGLTVVLSAGLGLWRGLKGVGRGRERPWLLPPAAFGIGLEVGFSSAGAGALGTLLLLHAT
RLSPQKVVGTDLLFGLVLALLGGGVHLAFGQVAPSLLLALASGGVAGGLLGALFATRLPKEPLRLALLLWLLFIGGQLVY
RGVVHG
>Mature_245_residues
AFLLGFLIAFAIGVTGVGAGTVTAPLLILALGLPPEVAVGTALLFGFLVKVPAGAVYLLRRQVDARALLRLLLGGVPGVL
LGSLLLTQLKGAKDLVLLLVGLTVVLSAGLGLWRGLKGVGRGRERPWLLPPAAFGIGLEVGFSSAGAGALGTLLLLHATR
LSPQKVVGTDLLFGLVLALLGGGVHLAFGQVAPSLLLALASGGVAGGLLGALFATRLPKEPLRLALLLWLLFIGGQLVYR
GVVHG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 24953; Mature: 24822

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLLGFLIAFAIGVTGVGAGTVTAPLLILALGLPPEVAVGTALLFGFLVKVPAGAVYLL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
RRQVDARALLRLLLGGVPGVLLGSLLLTQLKGAKDLVLLLVGLTVVLSAGLGLWRGLKGV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRGRERPWLLPPAAFGIGLEVGFSSAGAGALGTLLLLHATRLSPQKVVGTDLLFGLVLAL
CCCCCCCCCCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGGVHLAFGQVAPSLLLALASGGVAGGLLGALFATRLPKEPLRLALLLWLLFIGGQLVY
HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RGVVHG
HHHCCC
>Mature Secondary Structure 
AFLLGFLIAFAIGVTGVGAGTVTAPLLILALGLPPEVAVGTALLFGFLVKVPAGAVYLL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
RRQVDARALLRLLLGGVPGVLLGSLLLTQLKGAKDLVLLLVGLTVVLSAGLGLWRGLKGV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRGRERPWLLPPAAFGIGLEVGFSSAGAGALGTLLLLHATRLSPQKVVGTDLLFGLVLAL
CCCCCCCCCCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGGVHLAFGQVAPSLLLALASGGVAGGLLGALFATRLPKEPLRLALLLWLLFIGGQLVY
HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RGVVHG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]