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The map label for this gene is 55980628

Identifier: 55980628

GI number: 55980628

Start: 624756

End: 625658

Strand: Reverse

Name: 55980628

Synonym: TTHA0659

Alternate gene names: NA

Gene position: 625658-624756 (Counterclockwise)

Preceding gene: 55980630

Following gene: 55980622

Centisome position: 33.82

GC content: 69.32

Gene sequence:

>903_bases
ATGCCCCGCATGGAGGCCCTCTTCAACACCGTGGTCCCCGTGGCCCTGGTGGTCCTCTCCGGCTACCTCCTGGGGAGGCG
GCTGGAGATGGACCTCTCCACCCTAAGCCGCCTCACCCTCTACGCCCTGGTGCCCGCCCTCATCCTGGACAGCATGTACC
GGGCGGAGTACACCCTGGAGGGGGTGTGGGGCCTCGTCCTGGGGTTTTCCCTCACCTACGCCCTCCTCTTCCTCCTCGTC
CAGGGGGCGGGGAAGCTCTTTGGCCTCTCCCGGGAAACCACCAAGACCCTCCTCGTCTGCGGCCTCTTCCCCAACTCCGG
CAACATGGGCCTCTCCCTGGTCTACTTCGCCCTCGGGGAGGAGGGCCTGAGGCGGGCCGTGGTCTACTTCCTCCTCTCCA
GCGCCCTGATGTTCGGCCTCGGGCCCGCCTTCATCCGGGGAGGGGGCCTGAAGGAAGGCCTCCTCTTCACCCTGCGCCTC
CCCCTCTTCTACGCCCTCTTCCTGGGCCTCCTCCTCAAGGCCCTGGGCCTAAGCCTCCCCTTCCGGCTGGAGGAGGGGGT
GCGGCTCATGGGCCAGGCGGCCATCCCCGTCCTCCTCCTCACCCTGGGGATGCAGATGGGAAAGACCCGGTTCCACCTCG
GCCCCTTTGAGGGGGCGGCGAGCGCCCTGAGGCTCCTCCTCGCCCCCCTCGTGGCCTACGGGGTGGGGGCCCTCCTCGGC
CTTCCCCGGCTGGAGCACCAGGTCCTCGTCCTCCAGTCCGCCACCCCGGTGGCGGTGAACGCCTTCCTCCTCACCCGGGA
GTTCGGAGGGGACGCCCTAAGGGTGGCCCGGAGCGTGGTGGTCTCCACCTTCTTGGCCTTCCTCACCGTCCCCCTGGTCC
TCTACCTCCTCGGGGTCCGGTAG

Upstream 100 bases:

>100_bases
CGGGGAGGGCGAGGACCTGCCGCCTCGGGGCCTCTGCCCCCTTAAGGAGCACCTCCCGGATGGCCTCGGCGAGGGCGAGG
TGGCTCGGCATGCCCTTAGA

Downstream 100 bases:

>100_bases
GGAGGGACTGCCCAGGTCCAGCTGGAAGAGGGGCCTTCCCTCCCAGAGGCCCACCAGGCGGTGGTACCCGCTTCCCAAGG
GAAAGCGGGCCTCGTGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPRMEALFNTVVPVALVVLSGYLLGRRLEMDLSTLSRLTLYALVPALILDSMYRAEYTLEGVWGLVLGFSLTYALLFLLV
QGAGKLFGLSRETTKTLLVCGLFPNSGNMGLSLVYFALGEEGLRRAVVYFLLSSALMFGLGPAFIRGGGLKEGLLFTLRL
PLFYALFLGLLLKALGLSLPFRLEEGVRLMGQAAIPVLLLTLGMQMGKTRFHLGPFEGAASALRLLLAPLVAYGVGALLG
LPRLEHQVLVLQSATPVAVNAFLLTREFGGDALRVARSVVVSTFLAFLTVPLVLYLLGVR

Sequences:

>Translated_300_residues
MPRMEALFNTVVPVALVVLSGYLLGRRLEMDLSTLSRLTLYALVPALILDSMYRAEYTLEGVWGLVLGFSLTYALLFLLV
QGAGKLFGLSRETTKTLLVCGLFPNSGNMGLSLVYFALGEEGLRRAVVYFLLSSALMFGLGPAFIRGGGLKEGLLFTLRL
PLFYALFLGLLLKALGLSLPFRLEEGVRLMGQAAIPVLLLTLGMQMGKTRFHLGPFEGAASALRLLLAPLVAYGVGALLG
LPRLEHQVLVLQSATPVAVNAFLLTREFGGDALRVARSVVVSTFLAFLTVPLVLYLLGVR
>Mature_299_residues
PRMEALFNTVVPVALVVLSGYLLGRRLEMDLSTLSRLTLYALVPALILDSMYRAEYTLEGVWGLVLGFSLTYALLFLLVQ
GAGKLFGLSRETTKTLLVCGLFPNSGNMGLSLVYFALGEEGLRRAVVYFLLSSALMFGLGPAFIRGGGLKEGLLFTLRLP
LFYALFLGLLLKALGLSLPFRLEEGVRLMGQAAIPVLLLTLGMQMGKTRFHLGPFEGAASALRLLLAPLVAYGVGALLGL
PRLEHQVLVLQSATPVAVNAFLLTREFGGDALRVARSVVVSTFLAFLTVPLVLYLLGVR

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32410; Mature: 32278

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRMEALFNTVVPVALVVLSGYLLGRRLEMDLSTLSRLTLYALVPALILDSMYRAEYTLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVWGLVLGFSLTYALLFLLVQGAGKLFGLSRETTKTLLVCGLFPNSGNMGLSLVYFALGE
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHCH
EGLRRAVVYFLLSSALMFGLGPAFIRGGGLKEGLLFTLRLPLFYALFLGLLLKALGLSLP
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FRLEEGVRLMGQAAIPVLLLTLGMQMGKTRFHLGPFEGAASALRLLLAPLVAYGVGALLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPRLEHQVLVLQSATPVAVNAFLLTREFGGDALRVARSVVVSTFLAFLTVPLVLYLLGVR
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRMEALFNTVVPVALVVLSGYLLGRRLEMDLSTLSRLTLYALVPALILDSMYRAEYTLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVWGLVLGFSLTYALLFLLVQGAGKLFGLSRETTKTLLVCGLFPNSGNMGLSLVYFALGE
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHCH
EGLRRAVVYFLLSSALMFGLGPAFIRGGGLKEGLLFTLRLPLFYALFLGLLLKALGLSLP
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FRLEEGVRLMGQAAIPVLLLTLGMQMGKTRFHLGPFEGAASALRLLLAPLVAYGVGALLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPRLEHQVLVLQSATPVAVNAFLLTREFGGDALRVARSVVVSTFLAFLTVPLVLYLLGVR
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]