| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is mrp [H]
Identifier: 55980623
GI number: 55980623
Start: 621300
End: 622352
Strand: Direct
Name: mrp [H]
Synonym: TTHA0654
Alternate gene names: 55980623
Gene position: 621300-622352 (Clockwise)
Preceding gene: 55980621
Following gene: 55980624
Centisome position: 33.59
GC content: 71.6
Gene sequence:
>1053_bases ATGGCGCTTACGGAAGAGCGGGTCCTCGAGGCCCTGCGCACCGTGATGGACCCCGAGCTCGGCAAGGACCTCGTCTCCTT GGGCATGGTGGACGAGGTCCGGGTGGAGGGGGGGCGGGTGGACCTCCTGGTGAACCTCACCACCCCGGCCTGCCCCCTCA AGGGGCAGATTGAGGCGGACATCCGGCGGGCCCTCGCCCCCTTGGGGGCGGAGGAGGTCCGGGTGCGCTTCGGCGGGGGC GTGCGCCCCCCTGAGCGCTACGCCCTCCCCGGGGTCAAGCACGTGGTGGCCGTGGCCTCGGGCAAGGGCGGGGTGGGGAA GAGCACCGTGGCCGCCAACCTGGCCCTGGCCTTAAGCCGGGAAGGGGCCAAGGTGGGCCTTTTGGACGCCGACCTCTACG GGCCGAGCCAGGCGAAGATGTTCGGCCTCGAGGGCATGCGCCTCAAGGTGGACCAGGACCGCAGGATCCTCCCCTTGGAG GCCCACGGGATCAAGGTCCTCTCCATCGCCAACATCGTCCCCCCGGGGCAGGCCCTGGCCTGGCGGGGGCCCATCCTCCA CGGCACCCTGAAGCAGTTCCTGCAGGACGTGAACTGGGGGGAGCTGGACTACCTGGTGGTGGACCTTCCCCCGGGGACGG GGGACGTGCAGCTCAGCCTTTCCCAGCTCACCCAGGTCTCGGGCGGGGTCATCGTCACCACGCCCCAGGAGGTGGCCCTC ATTGACGCCGAGCGGGCGGCGGACATGTTCCGGAAGCTCCAGGTCCCGGTCCTCGGCGTCCTGGAGAACATGAGCGCCTT CCTCTGCCCCCACTGCGGCAAGCCCACCCCCATCTTCGGGGAGGGGGGCGGGAGGCGCCTGGCGGAGAGGCTCAAGACCC GCTTCCTGGGGGAGATCCCCCTCACCCTGGCCTTGCGGGAGAGCGGGGACCGGGGCGTGCCCGTCCTGGCGCAGGACCCC GAGGGCCTCGAGGCCCAGGCCTTCCTGAAGGCGGCCCGGGAGCTCGCCGCCGCCTTGAGCGTGCAGACCTTCCTCCCCCT CCCCATGGCCTGA
Upstream 100 bases:
>100_bases GCGCCGCTTGCGCCACTCGGGGTACACGAGACGAGTATACCCGGCCTTTGTGCCTTTCGCCCTTGCCCAAAACTATCCTG GGGTATACTCTAGGCCCGGT
Downstream 100 bases:
>100_bases ACCATGGTCCTCCTGGAAGGCACCAAGGAACGGGTTCTGGAGCTCCTTAGGGCCAGGCCCCGCACCGCCAAGGAGGTGGC GGAAGCCTTGGGGGTGAGCC
Product: ATP-binding Mrp/Nbp35 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MALTEERVLEALRTVMDPELGKDLVSLGMVDEVRVEGGRVDLLVNLTTPACPLKGQIEADIRRALAPLGAEEVRVRFGGG VRPPERYALPGVKHVVAVASGKGGVGKSTVAANLALALSREGAKVGLLDADLYGPSQAKMFGLEGMRLKVDQDRRILPLE AHGIKVLSIANIVPPGQALAWRGPILHGTLKQFLQDVNWGELDYLVVDLPPGTGDVQLSLSQLTQVSGGVIVTTPQEVAL IDAERAADMFRKLQVPVLGVLENMSAFLCPHCGKPTPIFGEGGGRRLAERLKTRFLGEIPLTLALRESGDRGVPVLAQDP EGLEAQAFLKAARELAAALSVQTFLPLPMA
Sequences:
>Translated_350_residues MALTEERVLEALRTVMDPELGKDLVSLGMVDEVRVEGGRVDLLVNLTTPACPLKGQIEADIRRALAPLGAEEVRVRFGGG VRPPERYALPGVKHVVAVASGKGGVGKSTVAANLALALSREGAKVGLLDADLYGPSQAKMFGLEGMRLKVDQDRRILPLE AHGIKVLSIANIVPPGQALAWRGPILHGTLKQFLQDVNWGELDYLVVDLPPGTGDVQLSLSQLTQVSGGVIVTTPQEVAL IDAERAADMFRKLQVPVLGVLENMSAFLCPHCGKPTPIFGEGGGRRLAERLKTRFLGEIPLTLALRESGDRGVPVLAQDP EGLEAQAFLKAARELAAALSVQTFLPLPMA >Mature_349_residues ALTEERVLEALRTVMDPELGKDLVSLGMVDEVRVEGGRVDLLVNLTTPACPLKGQIEADIRRALAPLGAEEVRVRFGGGV RPPERYALPGVKHVVAVASGKGGVGKSTVAANLALALSREGAKVGLLDADLYGPSQAKMFGLEGMRLKVDQDRRILPLEA HGIKVLSIANIVPPGQALAWRGPILHGTLKQFLQDVNWGELDYLVVDLPPGTGDVQLSLSQLTQVSGGVIVTTPQEVALI DAERAADMFRKLQVPVLGVLENMSAFLCPHCGKPTPIFGEGGGRRLAERLKTRFLGEIPLTLALRESGDRGVPVLAQDPE GLEAQAFLKAARELAAALSVQTFLPLPMA
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=294, Percent_Identity=45.9183673469388, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI6912540, Length=239, Percent_Identity=43.9330543933054, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI118572611, Length=244, Percent_Identity=40.5737704918033, Blast_Score=183, Evalue=2e-46, Organism=Escherichia coli, GI87082045, Length=294, Percent_Identity=45.578231292517, Blast_Score=254, Evalue=8e-69, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=39.0625, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322188, Length=222, Percent_Identity=42.7927927927928, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321347, Length=258, Percent_Identity=38.3720930232558, Blast_Score=172, Evalue=5e-44, Organism=Drosophila melanogaster, GI221511043, Length=259, Percent_Identity=36.6795366795367, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24667611, Length=258, Percent_Identity=40.3100775193798, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI19921440, Length=237, Percent_Identity=36.7088607594937, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37263; Mature: 37132
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTEERVLEALRTVMDPELGKDLVSLGMVDEVRVEGGRVDLLVNLTTPACPLKGQIEAD CCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHEEECCCEEEEEEEECCCCCCCCCCHHHH IRRALAPLGAEEVRVRFGGGVRPPERYALPGVKHVVAVASGKGGVGKSTVAANLALALSR HHHHHCCCCHHHEEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEC EGAKVGLLDADLYGPSQAKMFGLEGMRLKVDQDRRILPLEAHGIKVLSIANIVPPGQALA CCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCEE WRGPILHGTLKQFLQDVNWGELDYLVVDLPPGTGDVQLSLSQLTQVSGGVIVTTPQEVAL ECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHHHHCCCEEEECCCCEEE IDAERAADMFRKLQVPVLGVLENMSAFLCPHCGKPTPIFGEGGGRRLAERLKTRFLGEIP EEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCC LTLALRESGDRGVPVLAQDPEGLEAQAFLKAARELAAALSVQTFLPLPMA EEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALTEERVLEALRTVMDPELGKDLVSLGMVDEVRVEGGRVDLLVNLTTPACPLKGQIEAD CCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHEEECCCEEEEEEEECCCCCCCCCCHHHH IRRALAPLGAEEVRVRFGGGVRPPERYALPGVKHVVAVASGKGGVGKSTVAANLALALSR HHHHHCCCCHHHEEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHEEEEC EGAKVGLLDADLYGPSQAKMFGLEGMRLKVDQDRRILPLEAHGIKVLSIANIVPPGQALA CCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCEE WRGPILHGTLKQFLQDVNWGELDYLVVDLPPGTGDVQLSLSQLTQVSGGVIVTTPQEVAL ECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHHHHCCCEEEECCCCEEE IDAERAADMFRKLQVPVLGVLENMSAFLCPHCGKPTPIFGEGGGRRLAERLKTRFLGEIP EEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCC LTLALRESGDRGVPVLAQDPEGLEAQAFLKAARELAAALSVQTFLPLPMA EEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]