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The map label for this gene is wcaJ [H]

Identifier: 55980611

GI number: 55980611

Start: 609961

End: 611202

Strand: Reverse

Name: wcaJ [H]

Synonym: TTHA0642

Alternate gene names: 55980611

Gene position: 611202-609961 (Counterclockwise)

Preceding gene: 55980612

Following gene: 55980610

Centisome position: 33.04

GC content: 66.02

Gene sequence:

>1242_bases
ATGAAGGCCATGGGTGCGTTGGAGCTCCGGTTGCCCTACCGCACCGTTAAAGCCCGCCCTTTCCCGGGCCTCGCCGTGGG
GCTTAGCCTCCTTCCCTCCCTGACGGCCGCCCTTCTGGTCTTCGGCCCCCCGCCTTGGCGGGGGGAGGTGGGGGTGCTCG
TGGGGCTTACCCTCCTCGCCCACCTCCTCGCCTTCTTCGCTACAGACCGCATGGCCCGCTACCCCGGGCGGGAGGCCTGG
GGGCTTGCCGCCTTCAACCTTCTCCTCTTCACCCTCCTCCTCCTCGCCGTCCTCGCCCTGGGGCGGCTCTACTACTCCCG
GGCCTTCCTCCTCCTCGCCACCTCCCTCGCCTTCCCCCTCCTCCTCCTCTACCTCCACCACCTGCCCCCCGTCCGCCTCG
CCCTCCTTCCCGGGGGGCTCGCGGACCGACTCAGGGGCATCGCCAAAGGGGTGAGGCCCATCGAGGACCTGGAGGAGGCC
GAGGGAGTGGTGGCGGACCTTCACCATCTGGACCCGAGGGCCCTTCCCCTCCTCGCCGAGGCCTCCCTGAGGGGGCTTCC
CATCCTCCACGCCGCCCTAGTGTACGAGGGGTACACGGGCCGGGTTCCCCTGGAGGGGAGCTATGGGGAAGGGCTTCTCG
TCCTCTCCGAGGGGAACCGGGGGCTTTACCCCTACTTCAAACGGCCCTTTGAGGTGGGCCTTGTCCTCCTCTTCGCCCCC
CTCATCCTCCTCCTCGGGCTTTTGGTGGCCCTTCTCGTCTACCTGGACCTGGGGCGGCCCGTCCTCTTCGCCCAGGAACG
GATGGGCCTCGGGGGGAGGCCCTTCAAGGCCTACAAGTTTCGCACCATGCGGGGAGCCCCCAGGGAGGGGGTCTACGCGG
GGGCGGAAGCAGACCGCATCACCCCCTTGGGGAAGCTCTTGCGAAAGCTCCGCTTAGACGAGTTGCCCCAGCTCTGGAAC
GTCCTTCGCGGCGAGATGGCCCTGGTAGGCCCCAGGCCCGAGCAAAAGGTGCTGGCGGAGAAATATGCCGAGGAAATTCC
CTCCTATATGCTACGCCACGTCGTCCGTCCCGGTCTCACCGGATGGGCCCAGGTGCACCACGGCTACGCGGAGGGTTTAG
AGGGAACCATAGAAAAGCTCAGCTATGATCTCTACTACGTGAAGCACTGTTCCTTTTGGTTAGACCTAAGGATCTTGGTA
CGCACCCTGTGGGTGATCCTCACTGGTTTTGGCGCAAAGTAA

Upstream 100 bases:

>100_bases
TCTAGATGGCATGCTCGCCCGGGTGTGGGCGGCCTACGAGGAGGTGCTCCGCCTATAGGGAAGCCCATTTGCACGCCTCC
CTCATTCCCCTCCTGGTAGG

Downstream 100 bases:

>100_bases
CGGGAGGTCAATGTGGAAACCCCCAGCGAGGAGCTAACCCTAAGGGACATCCTGGAAATCCTCAAGCGCCAGAAGGCCTG
GATCCTCACCCTCCCCCTCC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKAMGALELRLPYRTVKARPFPGLAVGLSLLPSLTAALLVFGPPPWRGEVGVLVGLTLLAHLLAFFATDRMARYPGREAW
GLAAFNLLLFTLLLLAVLALGRLYYSRAFLLLATSLAFPLLLLYLHHLPPVRLALLPGGLADRLRGIAKGVRPIEDLEEA
EGVVADLHHLDPRALPLLAEASLRGLPILHAALVYEGYTGRVPLEGSYGEGLLVLSEGNRGLYPYFKRPFEVGLVLLFAP
LILLLGLLVALLVYLDLGRPVLFAQERMGLGGRPFKAYKFRTMRGAPREGVYAGAEADRITPLGKLLRKLRLDELPQLWN
VLRGEMALVGPRPEQKVLAEKYAEEIPSYMLRHVVRPGLTGWAQVHHGYAEGLEGTIEKLSYDLYYVKHCSFWLDLRILV
RTLWVILTGFGAK

Sequences:

>Translated_413_residues
MKAMGALELRLPYRTVKARPFPGLAVGLSLLPSLTAALLVFGPPPWRGEVGVLVGLTLLAHLLAFFATDRMARYPGREAW
GLAAFNLLLFTLLLLAVLALGRLYYSRAFLLLATSLAFPLLLLYLHHLPPVRLALLPGGLADRLRGIAKGVRPIEDLEEA
EGVVADLHHLDPRALPLLAEASLRGLPILHAALVYEGYTGRVPLEGSYGEGLLVLSEGNRGLYPYFKRPFEVGLVLLFAP
LILLLGLLVALLVYLDLGRPVLFAQERMGLGGRPFKAYKFRTMRGAPREGVYAGAEADRITPLGKLLRKLRLDELPQLWN
VLRGEMALVGPRPEQKVLAEKYAEEIPSYMLRHVVRPGLTGWAQVHHGYAEGLEGTIEKLSYDLYYVKHCSFWLDLRILV
RTLWVILTGFGAK
>Mature_413_residues
MKAMGALELRLPYRTVKARPFPGLAVGLSLLPSLTAALLVFGPPPWRGEVGVLVGLTLLAHLLAFFATDRMARYPGREAW
GLAAFNLLLFTLLLLAVLALGRLYYSRAFLLLATSLAFPLLLLYLHHLPPVRLALLPGGLADRLRGIAKGVRPIEDLEEA
EGVVADLHHLDPRALPLLAEASLRGLPILHAALVYEGYTGRVPLEGSYGEGLLVLSEGNRGLYPYFKRPFEVGLVLLFAP
LILLLGLLVALLVYLDLGRPVLFAQERMGLGGRPFKAYKFRTMRGAPREGVYAGAEADRITPLGKLLRKLRLDELPQLWN
VLRGEMALVGPRPEQKVLAEKYAEEIPSYMLRHVVRPGLTGWAQVHHGYAEGLEGTIEKLSYDLYYVKHCSFWLDLRILV
RTLWVILTGFGAK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=197, Percent_Identity=39.0862944162437, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 45725; Mature: 45725

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMGALELRLPYRTVKARPFPGLAVGLSLLPSLTAALLVFGPPPWRGEVGVLVGLTLLA
CCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
HLLAFFATDRMARYPGREAWGLAAFNLLLFTLLLLAVLALGRLYYSRAFLLLATSLAFPL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLYLHHLPPVRLALLPGGLADRLRGIAKGVRPIEDLEEAEGVVADLHHLDPRALPLLAE
HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ASLRGLPILHAALVYEGYTGRVPLEGSYGEGLLVLSEGNRGLYPYFKRPFEVGLVLLFAP
HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHH
LILLLGLLVALLVYLDLGRPVLFAQERMGLGGRPFKAYKFRTMRGAPREGVYAGAEADRI
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEHHHCCCCCCCCCCCCCCCCC
TPLGKLLRKLRLDELPQLWNVLRGEMALVGPRPEQKVLAEKYAEEIPSYMLRHVVRPGLT
CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GWAQVHHGYAEGLEGTIEKLSYDLYYVKHCSFWLDLRILVRTLWVILTGFGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKAMGALELRLPYRTVKARPFPGLAVGLSLLPSLTAALLVFGPPPWRGEVGVLVGLTLLA
CCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
HLLAFFATDRMARYPGREAWGLAAFNLLLFTLLLLAVLALGRLYYSRAFLLLATSLAFPL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLYLHHLPPVRLALLPGGLADRLRGIAKGVRPIEDLEEAEGVVADLHHLDPRALPLLAE
HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ASLRGLPILHAALVYEGYTGRVPLEGSYGEGLLVLSEGNRGLYPYFKRPFEVGLVLLFAP
HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHH
LILLLGLLVALLVYLDLGRPVLFAQERMGLGGRPFKAYKFRTMRGAPREGVYAGAEADRI
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEHHHCCCCCCCCCCCCCCCCC
TPLGKLLRKLRLDELPQLWNVLRGEMALVGPRPEQKVLAEKYAEEIPSYMLRHVVRPGLT
CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GWAQVHHGYAEGLEGTIEKLSYDLYYVKHCSFWLDLRILVRTLWVILTGFGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]