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The map label for this gene is 55980609

Identifier: 55980609

GI number: 55980609

Start: 607649

End: 608062

Strand: Reverse

Name: 55980609

Synonym: TTHA0640

Alternate gene names: NA

Gene position: 608062-607649 (Counterclockwise)

Preceding gene: 55980610

Following gene: 55980608

Centisome position: 32.87

GC content: 63.53

Gene sequence:

>414_bases
ATGAACCGGGCGCGCGACTGGATGCGGCAAGCCGAGCGGGACCTTGAGCACGCCCAAAAGAGCCTGGAGCTTGGCCACTG
GGAATGGGCTTGCTTCGCCGCCCATCAGGCGGCGGAGAAAGCCCTCAAAGCGGTTTATTTCGCCTTGGGGGCCGAGGCCT
TCGGCCACGCGCTCACCCACCTCTTGGCCGGTCTTCACGAACGGCTCAACTTGACCCCCGAGCTCAGGCGCTGCGCCCTG
GTGCTGGATAGGCTCTACATCCCCACGCGCTATCCGGACAGCTGGGAGGCGGGTGCCCCTCTGGACTACTATGGAGAGGA
GGAGGCTCGGGATGCGCTCCTTTGTGCAGGAGAAATCCTACGGTTCGGTCAAAGTGTTCTGGCTGGACCGGGAGAGACTT
CTTCAGGCCCTTGA

Upstream 100 bases:

>100_bases
TCTTCGCCCTGGCGGTGGCCTTGGGCCTGATGCTCGGGGTGATGGCCGCCTTCGTGGCCGAGGCCCTAAGGCCCCAAGAG
GCCCCCTCTGGGGGAAGCGC

Downstream 100 bases:

>100_bases
AGAAAAGGCGGCCGAGCTCCTCGCCACCTTCCCCGAGGTCCTCGCCGTGGTCCTCTTCGGCTCCTTGGCCCGGGGAGAGG
CGACGCCGCGGAGCGACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain-Containing Protein; Hepn Domain Protein; Hepn Domain; Amidophosphoribosyltransferase

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNRARDWMRQAERDLEHAQKSLELGHWEWACFAAHQAAEKALKAVYFALGAEAFGHALTHLLAGLHERLNLTPELRRCAL
VLDRLYIPTRYPDSWEAGAPLDYYGEEEARDALLCAGEILRFGQSVLAGPGETSSGP

Sequences:

>Translated_137_residues
MNRARDWMRQAERDLEHAQKSLELGHWEWACFAAHQAAEKALKAVYFALGAEAFGHALTHLLAGLHERLNLTPELRRCAL
VLDRLYIPTRYPDSWEAGAPLDYYGEEEARDALLCAGEILRFGQSVLAGPGETSSGP
>Mature_137_residues
MNRARDWMRQAERDLEHAQKSLELGHWEWACFAAHQAAEKALKAVYFALGAEAFGHALTHLLAGLHERLNLTPELRRCAL
VLDRLYIPTRYPDSWEAGAPLDYYGEEEARDALLCAGEILRFGQSVLAGPGETSSGP

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRARDWMRQAERDLEHAQKSLELGHWEWACFAAHQAAEKALKAVYFALGAEAFGHALTH
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGLHERLNLTPELRRCALVLDRLYIPTRYPDSWEAGAPLDYYGEEEARDALLCAGEIL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RFGQSVLAGPGETSSGP
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNRARDWMRQAERDLEHAQKSLELGHWEWACFAAHQAAEKALKAVYFALGAEAFGHALTH
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGLHERLNLTPELRRCALVLDRLYIPTRYPDSWEAGAPLDYYGEEEARDALLCAGEIL
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RFGQSVLAGPGETSSGP
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA