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The map label for this gene is 55980598

Identifier: 55980598

GI number: 55980598

Start: 600132

End: 601199

Strand: Reverse

Name: 55980598

Synonym: TTHA0629

Alternate gene names: NA

Gene position: 601199-600132 (Counterclockwise)

Preceding gene: 55980599

Following gene: 55980596

Centisome position: 32.5

GC content: 70.6

Gene sequence:

>1068_bases
ATGCGCTGGCTGTTGGTGGTCGCAGGACTTCTCGCCGCCGGGGGGCTGGCCCAGACGCCGCCTCCCCCCGCGGCCCAGAC
GGCGGAACAGAACCCCTTAAGGCTCGGGGTCCAGCTCTACGCCCTGGGGCGGTACGACGCGGCCCTCACCCTCTTTGAGC
GGGCCCTAAAGGAGAACCCCCAGGACCCCGAGGCCCTCTACTGGCTCGCCCGGACCCAGCTCAAGCTCGGGCTCGTGAAC
CCCGCCCTGGAGAACGGCAAGACCCTCGTGGCCCGCACCCCCCGCTACCTGGGGGGCTACATGGTCCTCTCCGAGGCCTA
CGTGGCCCTTTACCGGCAGGCGGAGGACCGGGAGCGGGGCAAGGGCTACCTGGAGCAGGCCCTCTCCGTCCTCAAGGACG
CCGAGCGGGTCAACCCCCGCTACGCTCCCCTCCACCTGCAACGGGGCCTGGTCTACGCCCTCCTGGGCGAGCGGGACAAG
GCGGAGGCCTCCCTCAAACAGGCCCTGGCCCTCGAGGACACCCCCGAGATCCGCTCCGCCCTGGCGGAGCTCTACCTCTC
CATGGGCCGCCTGGACGAGGCCCTGGCCCAGTACGCCAAGGCCCTGGAGCAGGCCCCCAAGGACCTAGACCTGCGGGTGC
GGTACGCCTCCGCCCTCCTCCTCAAGGGGAAGGCGGAGGAGGCGGCCCGGGTGTTGGAGGAGGGGCACCGGATCAAGCCC
TTGAACGCCGAGGGCTGGTACACCCTGGGCCAGGCCTACCTCGCCCTGGGGCGGACCAAGGAGGCGGGGGTGGCCCTGGA
AAACGCCGTGGCCCTCGCCCCCCTGCGCTTCCCCGCCGCCTACTACTACCTGGGGCAGGTCTACCTGGCCCTCGGGGACT
ACCCGAAGGCGAAAAGCCGCCTCACGGTGGCGGTGCGCCTCGAGCCCAAGCGGGCGGAGTACCGCTACAGCCTCTGCCTG
GCGAACGAGAAGCTCGGGGACAAGGAGGGGGCCCGCTACCAGTGCCAGGAGGCCTTGAAGCTTAGGCCGGACTACAAGGA
GGCCGAAGAGGTGCTGAAGCGCCTCTAA

Upstream 100 bases:

>100_bases
GTGGAGATCACCCGGGCCTACGTGGAGAAGCGGCTAGAGGCGGTCTTCGCCTCCCCGGACCTCACCCGCTTCGTGCTGTG
AAGGCTGTGAAGGAGGAAGG

Downstream 100 bases:

>100_bases
GCCTTGGGCTCCTCCTTCTTCTCCTCCTCCTGGATCCCCTTCCTAAACTCCCGGGCCGCCTGGCCGATGCCGCGGGCGAG
CTCGGGAAGCTTCTTGGCGC

Product: O-linked GlcNAc transferase

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Peptidase; Tetratricopeptide Repeat Family; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat-Containing O-Linked GlcNAc Transferase; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MRWLLVVAGLLAAGGLAQTPPPPAAQTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVN
PALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDK
AEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARVLEEGHRIKP
LNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLRFPAAYYYLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCL
ANEKLGDKEGARYQCQEALKLRPDYKEAEEVLKRL

Sequences:

>Translated_355_residues
MRWLLVVAGLLAAGGLAQTPPPPAAQTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVN
PALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDK
AEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARVLEEGHRIKP
LNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLRFPAAYYYLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCL
ANEKLGDKEGARYQCQEALKLRPDYKEAEEVLKRL
>Mature_355_residues
MRWLLVVAGLLAAGGLAQTPPPPAAQTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVN
PALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDK
AEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARVLEEGHRIKP
LNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLRFPAAYYYLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCL
ANEKLGDKEGARYQCQEALKLRPDYKEAEEVLKRL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=315, Percent_Identity=25.0793650793651, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=362, Percent_Identity=25.414364640884, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=362, Percent_Identity=25.414364640884, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39514; Mature: 39514

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLLVVAGLLAAGGLAQTPPPPAAQTAEQNPLRLGVQLYALGRYDAALTLFERALKENP
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCHHHHHHHHHHHHHCCC
QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERG
CCHHHHHHHHHHHHHHEECCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
LAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARVLEEGHRIKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCCCC
LNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLRFPAAYYYLGQVYLALGDYPKAKSR
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
LTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLRPDYKEAEEVLKRL
EEEEEEECCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRWLLVVAGLLAAGGLAQTPPPPAAQTAEQNPLRLGVQLYALGRYDAALTLFERALKENP
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCHHHHHHHHHHHHHCCC
QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERG
CCHHHHHHHHHHHHHHEECCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
LAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARVLEEGHRIKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCCCC
LNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLRFPAAYYYLGQVYLALGDYPKAKSR
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
LTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLRPDYKEAEEVLKRL
EEEEEEECCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA