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The map label for this gene is 55980592

Identifier: 55980592

GI number: 55980592

Start: 594860

End: 595549

Strand: Reverse

Name: 55980592

Synonym: TTHA0623

Alternate gene names: NA

Gene position: 595549-594860 (Counterclockwise)

Preceding gene: 55980596

Following gene: 55980588

Centisome position: 32.2

GC content: 72.46

Gene sequence:

>690_bases
ATGGCTCCAGCATACACTGGAAAGGTGGAACGCTACCGGCTGGAAGAGGGCATCGTGGTGGGCCGGAAGCCCCTGCCCCA
GGGGGACCTCCTCCTCCGCCTGGTGACGCCCCGGGGGAGCCTCGAGGCGGTGGTCCGGAAGGGGCAGAGGCCCACGGGGC
GTACGGGGAGGCTCTCCCTCTTCCACCACGTGCGCTTCCAGCTCTACGCCAAGGGGGAGGGCCTGCCCACCCTGACCCAG
GCGGAGCTTTTGGGCAGGCTCCACGGCCTGGAGGCGCCCCGCCGCTTCCTCCTCGCCGCCTTCCTCGCCGAGCTCGCCTA
CCGCCTGGCCTCCCCCGAGGCCGCCCCCAGGATCTACCCCCTTCTGGTCTCGGGCCTCCGGGGGATCGCCAAGCACGAGG
ACCCCCTCCTTCCCCTGGTCTGGGCGGGCTGGCGGGTGGCCAAGGCGGGGGGGATCGGGCCCAACCTGGAAGGGGAGGGC
CTCCGCCTGAAGAGGGGGAGGCTCGGGGAGGAGGGGGTCTACCTGGGGCGGGAGGGGGTGGAGGCCTTAAAGGCCACCCT
CCGCCTCCCCGGGGCCCAGGCCCTTCCCCACCTGGAAGGGGCCCCCTTAAACCGGCTCTTCCTGGCGCTCAAGGCCCACG
CGGAGGAGGCCCTGGGGCCCTTGCGCTCGGCCGAGGCTATAGGGGTTTGA

Upstream 100 bases:

>100_bases
GGTGAAGATCCACCCCCCGAGCCAGAAGGCGAGGAGCACCCCCACGACCACCAAAAGCCCCAGCACCACCCACTCCAGGA
TGTCCCTCAGCGTCCGCTCC

Downstream 100 bases:

>100_bases
TCTCCAGGATGGTGTAGACCTGGGCGCCCTTCTTGCCCCGGATCTCCACCACGTCCCCCACCTTCTTGCCGAGGAGGGCC
TGGCCCAGGGGGGACTCGTC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination Protein O Reco; Recombinational DNA Repair Protein

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAPAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQRPTGRTGRLSLFHHVRFQLYAKGEGLPTLTQ
AELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRIYPLLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPNLEGEG
LRLKRGRLGEEGVYLGREGVEALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV

Sequences:

>Translated_229_residues
MAPAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQRPTGRTGRLSLFHHVRFQLYAKGEGLPTLTQ
AELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRIYPLLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPNLEGEG
LRLKRGRLGEEGVYLGREGVEALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV
>Mature_228_residues
APAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQRPTGRTGRLSLFHHVRFQLYAKGEGLPTLTQA
ELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRIYPLLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPNLEGEGL
RLKRGRLGEEGVYLGREGVEALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV

Specific function: Unknown

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24802; Mature: 24671

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQRPTGRTGRLSL
CCCCCCCCHHEEECCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHH
FHHVRFQLYAKGEGLPTLTQAELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRIYP
HEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPNLEGEGLRLKRGRLGEEGVYLGREGV
HHHHHHHHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCEEEECCCCCCCCEEECHHHH
EALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQRPTGRTGRLSL
CCCCCCCHHEEECCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHH
FHHVRFQLYAKGEGLPTLTQAELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRIYP
HEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPNLEGEGLRLKRGRLGEEGVYLGREGV
HHHHHHHHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCEEEECCCCCCCCEEECHHHH
EALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA